RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 KIR2DL5BA0A0G2JN68 375 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 KIR2DL5BA0A0G2JPC4 375 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 SCGB1D1O95968 90 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 MT-CO2P00403 227 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 LINC00869P0C866 280 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 SAA2P0DJI9 122 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 LINC00310P59036 64 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 WFDC8Q8IUA0 241 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 KIR2DL5AQ8N109 375 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 NEUROG1Q92886 237 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 MS4A10Q96PG2 267 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 IDI2-AS1Q9NZ38 188 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 NAGKQ9UJ70 344 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 SLC17A3O00476 420 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 ESDP10768 282 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 CBLN1P23435 193 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 LGALS4P56470 323 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 ZNF90Q03938 601 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 RAB31Q13636 194 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 USF2Q15853 346 aaPredicted RBP12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 ARL2-SNX15V9GYD0 113 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 KBTBD11-OT1A0A1B0GTJ5 212 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 GRIFINA4D1Z8 144 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 EREGO14944 169 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 SELLP14151 372 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 IGFBP2P18065 325 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 GATA4P43694 442 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 OR4P4Q8NGL7 312 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 CMTM2Q8TAZ6 248 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 RND1Q92730 232 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 EAF1Q96JC9 268 aaPredicted RBP12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 VKORC1Q9BQB6 163 aa12.04□□□□□ -0.48
PRPF38B-204ENST00000467302 OR10J1P30954 320 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 TNFAIP6P98066 277 aaPredicted RBP12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 ZNF439Q8NDP4 499 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 FAM222BQ8WU58 562 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 ENY2Q9NPA8 101 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 SLC25A10Q9UBX3 287 aaPredicted RBP12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 IL19Q9UHD0 177 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 SLC45A2Q9UMX9 530 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 DPRXA6NFQ7 191 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 MYOD1P15172 320 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 TNFSF4P23510 183 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 MIR17HGQ75NE6 70 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 RAB9BQ9NP90 201 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 V9GYV3 84 aa12.03□□□□□ -0.48
PRPF38B-204ENST00000467302 IGHV1-46P01743 117 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 THBDP07204 575 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 FOSL1P15407 271 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 CASP6P55212 293 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 NUTF2P61970 127 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 KLRB1Q12918 225 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 Q6ZWC4 215 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 CORO2AQ92828 525 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 OR51B2Q9Y5P1 312 aa12.02□□□□□ -0.49
PRPF38B-204ENST00000467302 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 NEU1Q99519 415 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 GCM1Q9NP62 436 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 PRNDQ9UKY0 176 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 OR10J4P0C629 311 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 CRISP2P16562 243 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 TPPP2P59282 170 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 PRCDQ00LT1 54 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 DUX4L9Q6RFH8 374 aaPredicted RBP12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 LYG1Q8N1E2 194 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 OR1L6Q8NGR2 347 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 ZNF503Q96F45 646 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 LINC00574Q9H8X3 128 aa12.01□□□□□ -0.49
PRPF38B-204ENST00000467302 DSCAMO60469 2012 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 SERF1AO75920 110 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 ACTL6BO94805 426 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 BSPH1Q075Z2 132 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 Q0VG73 95 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 OR5I1Q13606 314 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 PSG5Q15238 335 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 RPEL1Q2QD12 228 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 NABP2Q9BQ15 211 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 NGBQ9NPG2 151 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 TMEM167BQ9NRX6 74 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 CBLN4Q9NTU7 201 aa12□□□□□ -0.49
PRPF38B-204ENST00000467302 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 J3QR06 171 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 UPK2O00526 184 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms