RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 TMEM231Q9H6L2 316 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 TREM1Q9NP99 234 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 FAM96BQ9Y3D0 163 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 CSMD2Q7Z408 3487 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 TMEM218A2RU14 115 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 IGKV1D-33P01593 117 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 IGKV1-33P01594 117 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 CD5P06127 495 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 PAX6P26367 422 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 ACSM6Q6P461 480 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 NPVFQ9HCQ7 196 aa16.93■□□□□ 0.3
PPP1R3F-203ENST00000466508 POLQO75417 2590 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 A0A1B0GV50 99 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 MOSP00540 346 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 COMPP49747 757 aaPredicted RBP16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 TNXAQ16473 311 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 DYNAPQ8N1N2 210 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 SFT2D1Q8WV19 159 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 FBXL15Q9H469 300 aa16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 LSM4Q9Y4Z0 139 aaKnown RBP16.92■□□□□ 0.3
PPP1R3F-203ENST00000466508 TRAV1-1A0A0B4J248 108 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 HBE1P02100 147 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 MBP02144 154 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 RPL27AP46776 148 aaKnown RBP16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 PAX8Q06710 450 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 MMDQ15546 238 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 C17orf50Q8WW18 174 aa16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 RCC1LQ96I51 464 aaKnown RBP16.91■□□□□ 0.3
PPP1R3F-203ENST00000466508 FFAR4Q5NUL3 377 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 MRPL41Q8IXM3 137 aaKnown RBP16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 EAF1Q96JC9 268 aaPredicted RBP16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 SCRT1Q9BWW7 348 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 SVEP1Q4LDE5 3571 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 IGLC7A0M8Q6 106 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 NBR2O15453 112 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 SOX15O60248 233 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 OR13C7P0DN81 318 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 RAB2AP61019 212 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 PLGLAQ15195 96 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 ZNF726P1Q15940 193 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 GUK1Q16774 197 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 RPP25LQ8N5L8 163 aaKnown RBP16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 NPBQ8NG41 125 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 OR2T10Q8NGZ9 312 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 MALSU1Q96EH3 234 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 MGST2Q99735 147 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 ABCA12Q86UK0 2595 aa16.9■□□□□ 0.3
PPP1R3F-203ENST00000466508 NDUFA3O95167 84 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 SNRNP70P08621 437 aaKnown RBP16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 CD24P25063 80 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 SUB1P53999 127 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 CCL20P78556 96 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 HES1Q14469 280 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 TEPPQ6URK8 271 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 MBD3L1Q8WWY6 194 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 C1orf159Q96HA4 380 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 PBDC1Q9BVG4 233 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 KIAA1456Q9P272 454 aa16.89■□□□□ 0.29
PPP1R3F-203ENST00000466508 SAA4P35542 130 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 GNB1P62873 340 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 P2RX4Q99571 388 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 GGTLC1Q9BX51 225 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 ADCYAP1P18509 176 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 OPRK1P41145 380 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 SSBP2P81877 361 aaPredicted RBP16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 CD69Q07108 199 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 SSX7Q7RTT5 188 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 RNASEH2CQ8TDP1 164 aaKnown RBP16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 AJUBAQ96IF1 538 aa16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 EIF5A2Q9GZV4 153 aaKnown RBP16.88■□□□□ 0.29
PPP1R3F-203ENST00000466508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 APOC3P02656 99 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 M6PRP20645 277 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 EBI3Q14213 229 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 PEA15Q15121 130 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 CLEC12BQ2HXU8 276 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 ZNF114Q8NC26 417 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 OR10G4Q8NGN3 311 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 OR10G9Q8NGN4 311 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 OR10G7Q8NGN6 311 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 CACNG8Q8WXS5 425 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 KCNIP2Q9NS61 270 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 TEX15Q9BXT5 2789 aa16.87■□□□□ 0.29
PPP1R3F-203ENST00000466508 C9JQL5 133 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 FCN1O00602 326 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 SLC25A16P16260 332 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 FBLN7Q53RD9 439 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 LCN15Q6UWW0 184 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 SRSF12Q8WXF0 261 aaKnown RBP16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 CENPVL3A0A0U1RRI6 287 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 NPFFO15130 113 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 REG1AP05451 166 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 GPX4P36969 197 aaPredicted RBP16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 RAB31Q13636 194 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 ACOT6Q3I5F7 207 aaPredicted RBP16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 C10orf91Q5T1B1 145 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 TMEM144Q7Z5S9 345 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 Q8N6K4 173 aa16.86■□□□□ 0.29
PPP1R3F-203ENST00000466508 MAP1LC3B2A6NCE7 125 aa16.85■□□□□ 0.29
PPP1R3F-203ENST00000466508 TEX22C9J3V5 150 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms