RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 SULT1A3P0DMM9 295 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 SULT1A4P0DMN0 295 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 ATP5G2Q06055 141 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 DEFB136Q30KP8 78 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 ZNF343Q6P1L6 599 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 C19orf35Q6ZS72 473 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 DUSP18Q8NEJ0 188 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 OR11H1Q8NG94 326 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 TMED3Q9Y3Q3 217 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 VWFP04275 2813 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 A0A1B0GU03 582 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 CYB5BO43169 146 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 OR2J3O76001 311 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 H2AFB2P0C5Z0 115 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 DEFA1P59665 94 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 DEFA3P59666 94 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 SPCS3P61009 180 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 FHL3Q13643 280 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 OR2C3Q8N628 320 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 LINC00482Q8N8I6 264 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 OR1L6Q8NGR2 347 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 COQ8AQ8NI60 647 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 DUX3Q96PT4 197 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 FBXL7Q9UJT9 491 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 DMRT1Q9Y5R6 373 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
HOXA9-203ENST00000465941 TRRAPQ9Y4A5 3859 aa14.22□□□□□ -0.13
HOXA9-203ENST00000465941 NDUFB8O95169 186 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 HSPB1P04792 205 aaKnown RBP14.21□□□□□ -0.13
HOXA9-203ENST00000465941 SLC25A6P12236 298 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 ERHP84090 104 aaKnown RBP14.21□□□□□ -0.13
HOXA9-203ENST00000465941 DEFA5Q01523 94 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 ZNF616Q08AN1 781 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 C15orf32Q32M92 178 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 ZNF114Q8NC26 417 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 ENKURQ8TC29 256 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 THYN1Q9P016 225 aa14.21□□□□□ -0.13
HOXA9-203ENST00000465941 SPINK9Q5DT21 86 aa14.2□□□□□ -0.14
HOXA9-203ENST00000465941 NRARPQ7Z6K4 114 aa14.2□□□□□ -0.14
HOXA9-203ENST00000465941 OR1P1Q8NH06 330 aa14.2□□□□□ -0.14
HOXA9-203ENST00000465941 MITD1Q8WV92 249 aa14.2□□□□□ -0.14
HOXA9-203ENST00000465941 DPF1Q92782 380 aa14.2□□□□□ -0.14
HOXA9-203ENST00000465941 RANGRFQ9HD47 186 aaPredicted RBP14.2□□□□□ -0.14
HOXA9-203ENST00000465941 PKD1L1Q8TDX9 2849 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 PITX3O75364 302 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 OR8U8P0C7N1 319 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 CD33P20138 364 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 MFAP2P55001 183 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 FAM209BQ5JX69 171 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 SLC25A24Q6NUK1 477 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 OR52B4Q8NGK2 314 aa14.19□□□□□ -0.14
HOXA9-203ENST00000465941 PEF1Q9UBV8 284 aaKnown RBP14.19□□□□□ -0.14
HOXA9-203ENST00000465941 IGHV4OR15-8A0A075B7B6 117 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 A0A087WW49 117 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.18□□□□□ -0.14
HOXA9-203ENST00000465941 LINC01619G3V211 115 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 HOXB5P09067 269 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 EXOSC2Q13868 293 aaKnown RBP14.18□□□□□ -0.14
HOXA9-203ENST00000465941 GGNBP1Q5YKI7 109 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 CXorf58Q96LI9 332 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 ENY2Q9NPA8 101 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 HSPB7Q9UBY9 170 aa14.18□□□□□ -0.14
HOXA9-203ENST00000465941 TRBV7-1A0A0A6YYK4 115 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 IL5P05113 134 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 SNCAP37840 140 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 HOXA1P49639 335 aaPredicted RBP14.17□□□□□ -0.14
HOXA9-203ENST00000465941 SUB1P53999 127 aaKnown RBP eCLIP14.17□□□□□ -0.14
HOXA9-203ENST00000465941 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 PVRIGQ6DKI7 326 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 OR1S1Q8NH92 325 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 VN1R17PQ8TDU5 208 aa14.17□□□□□ -0.14
HOXA9-203ENST00000465941 ZNF431Q8TF32 576 aaPredicted RBP14.17□□□□□ -0.14
HOXA9-203ENST00000465941 ADAP1O75689 374 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 IFNA21P01568 189 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 BSXQ3C1V8 233 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 PLET1Q6UQ28 207 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 EEF1AKMT3Q96AZ1 226 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 SEC22CQ9BRL7 303 aa14.16□□□□□ -0.14
HOXA9-203ENST00000465941 CEBPZOSA8MTT3 80 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 FAM90A26D6RGX4 464 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 NXPH3O95157 252 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 TRBV12-3P01733 135 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 ZP3P21754 424 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 RCC1LQ96I51 464 aaKnown RBP14.15□□□□□ -0.14
HOXA9-203ENST00000465941 CCDC140Q96MF4 163 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 MARVELD1Q9BSK0 173 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 PALMDQ9NP74 551 aa14.15□□□□□ -0.14
HOXA9-203ENST00000465941 HEYLQ9NQ87 328 aaPredicted RBP14.15□□□□□ -0.14
HOXA9-203ENST00000465941 MFSD2BA6NFX1 497 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 MPTX1A8MV57 137 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 INMT-MINDY4F8WBC2 141 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 K7EIM0 57 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 RNASE2P10153 161 aaKnown RBP14.14□□□□□ -0.15
HOXA9-203ENST00000465941 HOXD3P31249 432 aaPredicted RBP14.14□□□□□ -0.15
HOXA9-203ENST00000465941 HTR2BP41595 481 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 SLURP1P55000 103 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms