RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ZCCHC24Q8N2G6 241 aaKnown RBP2.56□□□□□ -2
SNX4-202ENST00000465505 TEX29Q8N6K0 151 aa2.56□□□□□ -2
SNX4-202ENST00000465505 GVQW1Q8N7I0 195 aa2.56□□□□□ -2
SNX4-202ENST00000465505 OR4F17Q8NGA8 305 aa2.56□□□□□ -2
SNX4-202ENST00000465505 OR11H7Q8NGC8 314 aa2.56□□□□□ -2
SNX4-202ENST00000465505 OR5D16Q8NGK9 328 aa2.56□□□□□ -2
SNX4-202ENST00000465505 NT5CQ8TCD5 201 aa2.56□□□□□ -2
SNX4-202ENST00000465505 FGF11Q92914 225 aa2.56□□□□□ -2
SNX4-202ENST00000465505 DYNLL2Q96FJ2 89 aa2.56□□□□□ -2
SNX4-202ENST00000465505 FAM19A4Q96LR4 140 aa2.56□□□□□ -2
SNX4-202ENST00000465505 CARD19Q96LW7 228 aa2.56□□□□□ -2
SNX4-202ENST00000465505 OR4F4Q96R69 305 aa2.56□□□□□ -2
SNX4-202ENST00000465505 GNB4Q9HAV0 340 aa2.56□□□□□ -2
SNX4-202ENST00000465505 NRN1Q9NPD7 142 aa2.56□□□□□ -2
SNX4-202ENST00000465505 TMEM9BQ9NQ34 198 aa2.56□□□□□ -2
SNX4-202ENST00000465505 FKBP11Q9NYL4 201 aa2.56□□□□□ -2
SNX4-202ENST00000465505 ZNF226Q9NYT6 803 aa2.56□□□□□ -2
SNX4-202ENST00000465505 CLCF1Q9UBD9 225 aa2.56□□□□□ -2
SNX4-202ENST00000465505 OR5V1Q9UGF6 321 aa2.56□□□□□ -2
SNX4-202ENST00000465505 CACFD1Q9UGQ2 172 aa2.56□□□□□ -2
SNX4-202ENST00000465505 FUT9Q9Y231 359 aa2.56□□□□□ -2
SNX4-202ENST00000465505 ZNF257Q9Y2Q1 563 aa2.56□□□□□ -2
SNX4-202ENST00000465505 V9GYH0 126 aa2.56□□□□□ -2
SNX4-202ENST00000465505 ADGRL1O94910 1474 aa2.56□□□□□ -2
SNX4-202ENST00000465505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.56□□□□□ -2
SNX4-202ENST00000465505 DLC1Q96QB1 1528 aa2.56□□□□□ -2
SNX4-202ENST00000465505 NUP188Q5SRE5 1749 aa2.56□□□□□ -2
SNX4-202ENST00000465505 SIPA1L3O60292 1781 aaPredicted RBP2.56□□□□□ -2
SNX4-202ENST00000465505 PATJQ8NI35 1801 aa2.56□□□□□ -2
SNX4-202ENST00000465505 PHF3Q92576 2039 aaKnown RBP2.56□□□□□ -2
SNX4-202ENST00000465505 TRBV19A0A075B6N1 114 aa2.55□□□□□ -2
SNX4-202ENST00000465505 A0A087X002 238 aa2.55□□□□□ -2
SNX4-202ENST00000465505 LOC102724200A0A096LPH7 203 aaPredicted RBP2.55□□□□□ -2
SNX4-202ENST00000465505 C7orf77A4D0Y5 90 aa2.55□□□□□ -2
SNX4-202ENST00000465505 ZNF705GA8MUZ8 300 aaPredicted RBP2.55□□□□□ -2
SNX4-202ENST00000465505 K7EQS6 105 aa2.55□□□□□ -2
SNX4-202ENST00000465505 RGPD8O14715 1765 aaPredicted RBP2.55□□□□□ -2
SNX4-202ENST00000465505 PLA2G10O15496 165 aa2.55□□□□□ -2
SNX4-202ENST00000465505 WISP2O76076 250 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR2A4O95047 310 aa2.55□□□□□ -2
SNX4-202ENST00000465505 SFT2D2O95562 160 aa2.55□□□□□ -2
SNX4-202ENST00000465505 EPPINO95925 133 aa2.55□□□□□ -2
SNX4-202ENST00000465505 HLA-DRB1P01911 266 aa2.55□□□□□ -2
SNX4-202ENST00000465505 PGA4P0DJD7 388 aa2.55□□□□□ -2
SNX4-202ENST00000465505 IGLC2P0DOY2 106 aa2.55□□□□□ -2
SNX4-202ENST00000465505 IGLC3P0DOY3 106 aa2.55□□□□□ -2
SNX4-202ENST00000465505 CTLA4P16410 223 aa2.55□□□□□ -2
SNX4-202ENST00000465505 POLR2IP36954 125 aaKnown RBP2.55□□□□□ -2
SNX4-202ENST00000465505 TMEM258P61165 79 aa2.55□□□□□ -2
SNX4-202ENST00000465505 CRADDP78560 199 aa2.55□□□□□ -2
SNX4-202ENST00000465505 AKR1C1Q04828 323 aa2.55□□□□□ -2
SNX4-202ENST00000465505 ARFRP1Q13795 201 aa2.55□□□□□ -2
SNX4-202ENST00000465505 EBI3Q14213 229 aa2.55□□□□□ -2
SNX4-202ENST00000465505 DIAPH2-AS1Q14236 149 aa2.55□□□□□ -2
SNX4-202ENST00000465505 ZNF79Q15937 498 aa2.55□□□□□ -2
SNX4-202ENST00000465505 RRN3P1Q2M238 152 aa2.55□□□□□ -2
SNX4-202ENST00000465505 MIA3Q5JRA6 1907 aa2.55□□□□□ -2
SNX4-202ENST00000465505 FAM120AOSQ5T036 256 aa2.55□□□□□ -2
SNX4-202ENST00000465505 PVRIGQ6DKI7 326 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR4C11Q6IEV9 310 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR2T2Q6IF00 324 aa2.55□□□□□ -2
SNX4-202ENST00000465505 EDC4Q6P2E9 1401 aaKnown RBP2.55□□□□□ -2
SNX4-202ENST00000465505 LCN15Q6UWW0 184 aa2.55□□□□□ -2
SNX4-202ENST00000465505 Q6ZVH6 145 aa2.55□□□□□ -2
SNX4-202ENST00000465505 PRR22Q8IZ63 422 aa2.55□□□□□ -2
SNX4-202ENST00000465505 KLHDC1Q8N7A1 406 aa2.55□□□□□ -2
SNX4-202ENST00000465505 LRTM2Q8N967 370 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR4C16Q8NGL9 310 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR2A1Q8NGT9 310 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR4A5Q8NH83 315 aa2.55□□□□□ -2
SNX4-202ENST00000465505 TWIST2Q8WVJ9 160 aa2.55□□□□□ -2
SNX4-202ENST00000465505 APOBEC4Q8WW27 367 aaKnown RBP2.55□□□□□ -2
SNX4-202ENST00000465505 MUCL1Q96DR8 90 aa2.55□□□□□ -2
SNX4-202ENST00000465505 NEURL3Q96EH8 262 aa2.55□□□□□ -2
SNX4-202ENST00000465505 DNAJA3Q96EY1 480 aa2.55□□□□□ -2
SNX4-202ENST00000465505 OR2A7Q96R45 310 aa2.55□□□□□ -2
SNX4-202ENST00000465505 RGPD5Q99666 1765 aa2.55□□□□□ -2
SNX4-202ENST00000465505 THTPAQ9BU02 230 aa2.55□□□□□ -2
SNX4-202ENST00000465505 GNB1LQ9BYB4 327 aa2.55□□□□□ -2
SNX4-202ENST00000465505 LIME1Q9H400 295 aa2.55□□□□□ -2
SNX4-202ENST00000465505 GPATCH8Q9UKJ3 1502 aaKnown RBP2.55□□□□□ -2
SNX4-202ENST00000465505 NWD2Q9ULI1 1742 aa2.55□□□□□ -2
SNX4-202ENST00000465505 ORC6Q9Y5N6 252 aa2.55□□□□□ -2
SNX4-202ENST00000465505 HEBP2Q9Y5Z4 205 aa2.55□□□□□ -2
SNX4-202ENST00000465505 MAP3K4Q9Y6R4 1608 aa2.55□□□□□ -2
SNX4-202ENST00000465505 ARHGAP21Q5T5U3 1957 aa2.54□□□□□ -2
SNX4-202ENST00000465505 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ANAPC1Q9H1A4 1944 aa2.54□□□□□ -2
SNX4-202ENST00000465505 USP54Q70EL1 1684 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NESP48681 1621 aa2.54□□□□□ -2
SNX4-202ENST00000465505 CDC42BPGQ6DT37 1551 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MROH2BQ7Z745 1585 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TRBV24-1A0A075B6N3 115 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TRGV10A0A0A0MS01 117 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TRBV5-5A0A0J9YX44 114 aa2.54□□□□□ -2
SNX4-202ENST00000465505 LOC101059948A0A1B0GTJ6 334 aa2.54□□□□□ -2
SNX4-202ENST00000465505 LOC107986453A0A1B0GWG9 222 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ODAMA1E959 279 aa2.54□□□□□ -2
SNX4-202ENST00000465505 IZUMO1RA6ND01 250 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms