RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MAL2Q969L2 176 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 ADAT3Q96EY9 351 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-205ENST00000464541 IGF2BP2-AS1Q96M15 143 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 GABARAPL1Q9H0R8 117 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 RPUSD1Q9UJJ7 312 aaKnown RBP2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CYSLTR1Q9Y271 337 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 TRAPPC1Q9Y5R8 145 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 ROCK2O75116 1388 aaKnown RBP2.69□□□□□ -1.98
PTCD3-205ENST00000464541 ABCC12Q96J65 1359 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 THSD7AQ9UPZ6 1657 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 TRAV36DV7A0A075B6V5 113 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 TRAV38-1A0A0B4J264 116 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 IGLL5B9A064 214 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 C5orf58C9J3I9 102 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 PLA2G10O15496 165 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BOP23527 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 S100A4P26447 101 aaKnown RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 BLVRBP30043 206 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BBP33778 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BDP58876 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BCP62807 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST2H2BEQ16778 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 LTC4SQ16873 150 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 LRRC28Q86X40 367 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 C12orf45Q8N5I9 185 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 ZNF283Q8N7M2 679 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 CANT1Q8WVQ1 401 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BHQ93079 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 ERMAPQ96PL5 475 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BNQ99877 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BMQ99879 126 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 RTL8AQ9BWD3 113 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 RNF122Q9H9V4 155 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 EFCAB1Q9HAE3 211 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 FAM60AQ9NP50 221 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 CKLFQ9UBR5 152 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 HSPB8Q9UJY1 196 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 PHLDA3Q9Y5J5 127 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 KMT2EQ8IZD2 1858 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 SDK2Q58EX2 2172 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 MYO5BQ9ULV0 1848 aa2.68□□□□□ -1.98
PTCD3-205ENST00000464541 I3L521 148 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 K7EP13 123 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 NPPCP23582 126 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 CMPK1P30085 196 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 CSN1S1P47710 185 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 POLR2HP52434 150 aaKnown RBP2.67□□□□□ -1.98
PTCD3-205ENST00000464541 TAS2R20P59543 309 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 RPL30P62888 115 aaKnown RBP2.67□□□□□ -1.98
PTCD3-205ENST00000464541 ELF3P78545 371 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-205ENST00000464541 CCL20P78556 96 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 AKR1C1Q04828 323 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 OR8B8Q15620 311 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 IFT20Q8IY31 132 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H2BAQ96A08 127 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 B9D2Q9BPU9 175 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 TM2D3Q9BRN9 247 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 MND1Q9BWT6 205 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 TSSK6Q9BXA6 273 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 ZNF586Q9NXT0 402 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 SNX12Q9UMY4 172 aa2.67□□□□□ -1.98
PTCD3-205ENST00000464541 ZCCHC11Q5TAX3 1644 aaKnown RBP2.67□□□□□ -1.98
PTCD3-205ENST00000464541 BAZ2AQ9UIF9 1905 aaKnown RBP2.66□□□□□ -1.98
PTCD3-205ENST00000464541 ARAP1Q96P48 1450 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 A0A087WX48 190 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 IGKV1-12A0A0C4DH73 117 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 GRIFINA4D1Z8 144 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 NDUFB2O95178 105 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 IGKV1D-12P01611 117 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 PRM2P04554 102 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 UBBP0CG47 229 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 BCL2P10415 239 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 CD200P41217 278 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 CCR2P41597 374 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 RPL27AP46776 148 aaKnown RBP2.66□□□□□ -1.98
PTCD3-205ENST00000464541 HIST1H4AP62805 103 aaKnown RBP2.66□□□□□ -1.98
PTCD3-205ENST00000464541 SP6Q3SY56 376 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 TMEM136Q6ZRR5 245 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 EXOC3-AS1Q8N2X6 119 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 LRRC18Q8N456 261 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 C10orf126Q8N4M7 172 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 DAND5Q8N907 189 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 TMEM229BQ8NBD8 167 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 OR11G2Q8NGC1 345 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 LMX1AQ8TE12 382 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 RBPMSQ93062 196 aaKnown RBP2.66□□□□□ -1.98
PTCD3-205ENST00000464541 MGLLQ99685 303 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 SEC22CQ9BRL7 303 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 PLA2G12AQ9BZM1 189 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 OR2D2Q9H210 308 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 XAGE1AQ9HD64 81 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 FUT9Q9Y231 359 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 AMMECR1Q9Y4X0 333 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-205ENST00000464541 TRIOBPQ9H2D6 2365 aa2.66□□□□□ -1.98
PTCD3-205ENST00000464541 ITGB4P16144 1822 aa2.65□□□□□ -1.98
PTCD3-205ENST00000464541 DENND4BO75064 1496 aaPredicted RBP2.65□□□□□ -1.98
PTCD3-205ENST00000464541 NAV1Q8NEY1 1877 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms