RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 C5orf42Q9H799 3197 aa7.6□□□□□ -1.19
HPS4-208ENST00000464362 RELQ04864 619 aaPredicted RBP7.6□□□□□ -1.19
HPS4-208ENST00000464362 FAM162BQ5T6X4 162 aa7.6□□□□□ -1.19
HPS4-208ENST00000464362 KIR3DL3Q8N743 410 aa7.6□□□□□ -1.19
HPS4-208ENST00000464362 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
HPS4-208ENST00000464362 RANBP2P49792 3224 aaKnown RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 IGKV1-6A0A0C4DH72 117 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 OR9G9P0C7N8 305 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 MYOD1P15172 320 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 ACP1P24666 158 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 GPR6P46095 362 aaPredicted RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 RELBQ01201 579 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 SRSF6Q13247 344 aaKnown RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 PARD6GQ9BYG4 376 aaPredicted RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 CRIM1Q9NZV1 1036 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 TANC1Q9C0D5 1861 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 MYO9AB2RTY4 2548 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 IGHV2OR16-5A0A0B4J2B6 119 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 AHRRA9YTQ3 701 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 ARF6P62330 175 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 SRSF4Q08170 494 aaKnown RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 ECSCRQ19T08 205 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 ACSF3Q4G176 576 aaPredicted RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 WDR82Q6UXN9 313 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 ZNF497Q6ZNH5 498 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 GTF3AQ92664 365 aaKnown RBP7.59□□□□□ -1.19
HPS4-208ENST00000464362 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 IDI2-AS1Q9NZ38 188 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 SPRR3Q9UBC9 169 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 IL18BPO95998 194 aa7.59□□□□□ -1.19
HPS4-208ENST00000464362 TICRRQ7Z2Z1 1910 aa7.59□□□□□ -1.2
HPS4-208ENST00000464362 NDUFS8O00217 210 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 SERF1AO75920 110 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 IGF2RP11717 2491 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 EYSQ5T1H1 3165 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 A0A087WWC5 75 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 ISLRO14498 428 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 SNAI2O43623 268 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 UQCRFS1P47985 274 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
HPS4-208ENST00000464362 TRAV3A0A0B4J244 114 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 A8MWL6 223 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 GFRA1P56159 465 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 PAFAH1B2P68402 229 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 C1orf185Q5T7R7 199 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 DNM1P46Q6ZS02 220 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 GCSAMQ8N6F7 178 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
HPS4-208ENST00000464362 NTN3O00634 580 aaPredicted RBP7.58□□□□□ -1.2
HPS4-208ENST00000464362 CD40P25942 277 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 SPSB3Q6PJ21 355 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 GOLT1AQ6ZVE7 132 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 OR9G1Q8NH87 305 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 OR8B2Q96RD0 313 aa7.58□□□□□ -1.2
HPS4-208ENST00000464362 SSBP4Q9BWG4 385 aaPredicted RBP7.58□□□□□ -1.2
HPS4-208ENST00000464362 CEP295Q9C0D2 2601 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 A0A1B0GUS0 222 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 CD24P25063 80 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 FCGR2BP31994 310 aaPredicted RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 B3GALT5-AS1P59052 145 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SPATA31B1PQ5VZV4 182 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 RAB1CQ92928 201 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 TBL2Q9Y4P3 447 aaKnown RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 RBFOX2O43251 390 aaKnown RBP eCLIP7.57□□□□□ -1.2
HPS4-208ENST00000464362 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 AMBPP02760 352 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 TMEM42Q69YG0 159 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 TMEM256Q8N2U0 113 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 ZNF738Q8NE65 137 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 OR10W1Q8NGF6 305 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SRSF12Q8WXF0 261 aaKnown RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 GUCD1Q96NT3 240 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 PMCHL2Q9BQD1 86 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 HIGD1AQ9Y241 93 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SELENOKQ9Y6D0 94 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 FRMPD3Q5JV73 1810 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SAA2-SAA4A0A096LPE2 208 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 IGHV3-49A0A0A0MS15 119 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 TEX50A0A1B0GTY4 177 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 DLL1O00548 723 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SAA2P0DJI9 122 aaPredicted RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 PYYP10082 97 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 CD99P14209 185 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 CSRP1P21291 193 aaKnown RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 MAS1LP35410 378 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 RPL24P83731 157 aaKnown RBP7.57□□□□□ -1.2
HPS4-208ENST00000464362 MAP1LC3CQ9BXW4 147 aa7.57□□□□□ -1.2
HPS4-208ENST00000464362 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
HPS4-208ENST00000464362 LINC00473A8K010 186 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 LYNX1G3V0Z9 82 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 LYNX1P0DP58 116 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 GLRXP35754 106 aa7.56□□□□□ -1.2
HPS4-208ENST00000464362 LINC00305Q7Z4B0 112 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms