RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 FOLR2P14207 255 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 IL36BQ9NZH7 164 aa11.24□□□□□ -0.61
CHRNA4-202ENST00000463705 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 ICAM4Q14773 271 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 FAM159AQ6UWV7 190 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 CDX1P47902 265 aaPredicted RBP11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 NMUP48645 174 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 TAS2R60P59551 318 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 Q0VFX4 171 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 Q6AWC8 147 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 TMEM70Q9BUB7 260 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 HEATR5BQ9P2D3 2071 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 CGAP01215 116 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 HERPUD1Q15011 391 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
CHRNA4-202ENST00000463705 FOXI3A8MTJ6 420 aaPredicted RBP11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 A8MXK9 166 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 CIDEAO60543 219 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 PPP1R17O96001 155 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 SPATA45Q537H7 98 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 H3BTX0 84 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 RNF224P0DH78 156 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 CCL3L1P16619 93 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 C7orf69Q9H7B7 122 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 SRRM5B3KS81 715 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 F8VVB4 439 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 F8VWA3 439 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 ZNF385CQ66K41 422 aaPredicted RBP11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 LDLRAD4O15165 306 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 FOXL2NBQ6ZUU3 175 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 DSCR9P59020 149 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 COL5A1-AS1Q5SY13 56 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 ZNF502Q8TBZ5 544 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 PNRC2Q9NPJ4 139 aaKnown RBP11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
CHRNA4-202ENST00000463705 IGKV1-12A0A0C4DH73 117 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 IGKV1D-12P01611 117 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 CIARTQ8N365 385 aaPredicted RBP11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 OR4X2Q8NGF9 303 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 OR4D5Q8NGN0 318 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 IGKV1D-8A0A087WSZ0 117 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 PF4P02776 101 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 ID3Q02535 119 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
CHRNA4-202ENST00000463705 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 ERASQ7Z444 233 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 ASIPP42127 132 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 KIR2DL4Q99706 377 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 UQCR10Q9UDW1 63 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 WDR81Q562E7 1941 aa11.21□□□□□ -0.62
CHRNA4-202ENST00000463705 H7C1H1 209 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 IGHG3P01860 377 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MGAMO43451 1857 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 PAX1P15863 534 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 GPR183P32249 361 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 CDKN1AP38936 164 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 B3GALT5-AS1P59052 145 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 CD69Q07108 199 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 FOXF2Q12947 444 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 NEU1Q99519 415 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 EGR1P18146 543 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 LHFPL1Q86WI0 220 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 H0YIZ8 118 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MIR17HGQ75NE6 70 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 FAM169BQ8N8A8 192 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 RAB37Q96AX2 223 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
CHRNA4-202ENST00000463705 TRBV6-6A0A0A6YYG2 114 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 TMEM42Q69YG0 159 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
CHRNA4-202ENST00000463705 HAX1O00165 279 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms