RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 IL34Q6ZMJ4 242 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 Q8N1Y9 231 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 UXS1Q8NBZ7 420 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 OR5B3Q8NH48 314 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 VN1R17PQ8TDU5 208 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 FCAMRQ8WWV6 532 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 BSCL2Q96G97 398 aaPredicted RBP6.73□□□□□ -1.33
LDB1-203ENST00000461873 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 TM2D3Q9BRN9 247 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 C20orf24Q9BUV8 137 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 ENY2Q9NPA8 101 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 MRPL27Q9P0M9 148 aaKnown RBP6.73□□□□□ -1.33
LDB1-203ENST00000461873 IGLV11-55A0A075B6I3 123 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 TEX50A0A1B0GTY4 177 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 IZUMO1RA6ND01 250 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 OR2T8A6NH00 312 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 E7EUB6 86 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 GABARAPH6UMI1 98 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 CTDSPLO15194 276 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 PLA2G10O15496 165 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 NUPL2O15504 423 aaKnown RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 TGOLN2O43493 480 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 GSTZ1O43708 216 aaPredicted RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 YIF1AO95070 293 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 SCAF4O95104 1147 aaKnown RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 NAT1P18440 290 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 BMI1P35226 326 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 SNCAP37840 140 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 INPP1P49441 399 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 AKR1C2P52895 323 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 SUB1P53999 127 aaKnown RBP eCLIP6.72□□□□□ -1.33
LDB1-203ENST00000461873 ELLP55199 621 aaPredicted RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 RELQ04864 619 aaPredicted RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 CASC10Q5T4H9 136 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 TRIQKQ629K1 86 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 TBC1D26Q86UD7 250 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 CCDC71LQ8N9Z2 235 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 GPX8Q8TED1 209 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 MISP3Q96FF7 219 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 WDR89Q96FK6 387 aaPredicted RBP6.72□□□□□ -1.33
LDB1-203ENST00000461873 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 CCDC32Q9BV29 185 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 C21orf62Q9NYP8 219 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 COPZ2Q9P299 210 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 NSG2Q9Y328 171 aa6.72□□□□□ -1.33
LDB1-203ENST00000461873 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 TRAV3A0A0B4J244 114 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 IGHV3-35A0A0C4DH35 117 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 IGLC7A0M8Q6 106 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 M0QYG6 137 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 IFNA17P01571 189 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 TRIM16LQ309B1 348 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 SCGB2B2Q4G0G5 96 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 ZFAND6Q6FIF0 208 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 FAAP20Q6NZ36 180 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 BTNL8Q6UX41 500 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 DEFB125Q8N687 156 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 OR10W1Q8NGF6 305 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 ZNF502Q8TBZ5 544 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 ZFAND1Q8TCF1 268 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 SMIM4Q8WVI0 70 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 TRIM63Q969Q1 353 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 PINX1Q96BK5 328 aaKnown RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 RRNAD1Q96FB5 475 aaKnown RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 ZNF486Q96H40 463 aaPredicted RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 HIPK2Q9H2X6 1198 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 DAZ1Q9NQZ3 744 aaKnown RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 FAM212BQ9NTI7 297 aaPredicted RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 TBC1D24Q9ULP9 559 aa6.71□□□□□ -1.34
LDB1-203ENST00000461873 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
LDB1-203ENST00000461873 IGHV3-21A0A0B4J1V1 117 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 C15orf61A6NNL5 157 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 A8MWP6 167 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 NDUFA4O00483 81 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 GNG7O60262 68 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 CD7P09564 240 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 TBPP20226 339 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 APOC4P55056 127 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 MFAP4P55083 255 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 UCP3P55916 312 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 CMC4P56277 68 aaPredicted RBP6.7□□□□□ -1.34
LDB1-203ENST00000461873 TAS2R19P59542 299 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 TM4SF20Q53R12 229 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 TMEM61Q8N0U2 210 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 TOMM5Q8N4H5 51 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 OR2C3Q8N628 320 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 SLC35G3Q8N808 338 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 OR4D10Q8NGI6 311 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 CACNG8Q8WXS5 425 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 ATP6V0BQ99437 205 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 FXYD6Q9H0Q3 95 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms