RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 TMEM230Q96A57 120 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 CXorf58Q96LI9 332 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 OR4C12Q96R67 309 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 SLC25A21Q9BQT8 299 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 PLEKHA3Q9HB20 300 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 KLK9Q9UKQ9 250 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 F11RQ9Y624 299 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 S4R3C0 116 aa8.13□□□□□ -1.11
TRAPPC12-213ENST00000461577 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 TRBV7-1A0A0A6YYK4 115 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 A6NHS1 94 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 CENPXA8MT69 81 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 ST8SIA3O43173 380 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 GGCTO75223 188 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 P0C879 139 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 SYNJ2BPP57105 145 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 TMEM187Q14656 261 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 CLEC19AQ6UXS0 136 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 SLC35G3Q8N808 338 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 LHFPL5Q8TAF8 219 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 GALNT14Q96FL9 552 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 ENY2Q9NPA8 101 aa8.12□□□□□ -1.11
TRAPPC12-213ENST00000461577 A0A0B4J293 547 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 A0A0G2JRQ6 117 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 WI2-2373I1.2A0A1W2PRP0 233 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 MFSD2BA6NFX1 497 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 BMPR1BO00238 502 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 LY86O95711 162 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 ARL3P36405 182 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 RBMS2Q15434 407 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 CNPY1Q3B7I2 92 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 LGI3Q8N145 548 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 OR9G4Q8NGQ1 327 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 IL22RA2Q969J5 263 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 GPR146Q96CH1 333 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 SDHCQ99643 169 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 C7orf50Q9BRJ6 194 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 PRR13Q9NZ81 148 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 DMRT1Q9Y5R6 373 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
TRAPPC12-213ENST00000461577 IGHV3-21A0A0B4J1V1 117 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 CLEC3BP05452 202 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 IL7P13232 177 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 VAMP1P23763 118 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 SNCAP37840 140 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 HOXA1P49639 335 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 CCR6P51684 374 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 SUPT4H1P63272 117 aaKnown RBP8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 SRPXP78539 464 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 TMEM128Q5BJH2 165 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 DEFB121Q5J5C9 76 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 CENPSQ8N2Z9 138 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 OR1P1Q8NH06 330 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 VN1R17PQ8TDU5 208 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 CACNG5Q9UF02 275 aa8.1□□□□□ -1.11
TRAPPC12-213ENST00000461577 K7EIL1 84 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 OR2C1O95371 312 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 HLA-AP01891 365 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 SULT1A3P0DMM9 295 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 SULT1A4P0DMN0 295 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 GPR183P32249 361 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 SUB1P53999 127 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 MFAP2P55001 183 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 SPCS3P61009 180 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 DCTN2Q13561 401 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 FAM106AQ4KMX7 169 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 PLET1Q6UQ28 207 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 Q6ZRM9 215 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 UBAC2Q8NBM4 344 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 ZNF114Q8NC26 417 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 ZNF502Q8TBZ5 544 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 S100ZQ8WXG8 99 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 PRR25Q96S07 402 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 ZC4H2Q9NQZ6 224 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 C21orf62Q9NYP8 219 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 CACFD1Q9UGQ2 172 aa8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 ZNF256Q9Y2P7 627 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC12-213ENST00000461577 A0A0B4J2A0 478 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 DUXBA0A1W2PPF3 345 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 ZNF320A2RRD8 509 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 OR2T8A6NH00 312 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 NDUFB6O95139 128 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 SFT2D2O95562 160 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 CSN3P07498 182 aa8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 UBE2MP61081 183 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-213ENST00000461577 Q56UQ5 140 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms