RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 AP3S2P59780 193 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 WWC2-AS2Q96NR7 200 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 SORL1Q92673 2214 aa11.72□□□□□ -0.53
VARS-219ENST00000461328 IGHV3-21A0A0B4J1V1 117 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 ZNF320A2RRD8 509 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 IFNA17P01571 189 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 UCP1P25874 307 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 PRCDQ00LT1 54 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 KLK9Q2XQG4 91 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 SPANXN2Q5MJ10 180 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 IL34Q6ZMJ4 242 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 Q8N402 240 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 TOMM5Q8N4H5 51 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 OR1L6Q8NGR2 347 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 ZNF502Q8TBZ5 544 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 SCGB3A2Q96PL1 93 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 C5orf66Q9H5L9 145 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 SLC2A8Q9NY64 477 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 KLK9Q9UKQ9 250 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 V9GYH0 126 aa11.71□□□□□ -0.53
VARS-219ENST00000461328 DNAH9Q9NYC9 4486 aa11.71□□□□□ -0.54
VARS-219ENST00000461328 CLEC3BP05452 202 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
VARS-219ENST00000461328 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
VARS-219ENST00000461328 ERHP84090 104 aaKnown RBP11.7□□□□□ -0.54
VARS-219ENST00000461328 PLET1Q6UQ28 207 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 UBAC2Q8NBM4 344 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 MISP3Q96FF7 219 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
VARS-219ENST00000461328 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
VARS-219ENST00000461328 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 CRYM-AS1A6NIL9 109 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 MFAP2P55001 183 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 DHODHQ02127 395 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 Q56UQ5 140 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 OR1P1Q8NH06 330 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 TRIM63Q969Q1 353 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
VARS-219ENST00000461328 IGHV3-35A0A0C4DH35 117 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 LGALS9O00182 355 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 TGOLN2O43493 480 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 SNCAP37840 140 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 INPP1P49441 399 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 KLF9Q13886 244 aaPredicted RBP11.68□□□□□ -0.54
VARS-219ENST00000461328 ZNF79Q15937 498 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 CCDC190Q86UF4 302 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 SBSPONQ8IVN8 264 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
VARS-219ENST00000461328 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
VARS-219ENST00000461328 A0A0B4J293 547 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 A0A0G2JRQ6 117 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 CDS2O95674 445 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 P0C879 139 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 FOLR2P14207 255 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 AKR1C4P17516 323 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
VARS-219ENST00000461328 FAM219AQ8IW50 185 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 LHFPL5Q8TAF8 219 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 SCARB1Q8WTV0 552 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 GLYATL2Q8WU03 294 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
VARS-219ENST00000461328 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
VARS-219ENST00000461328 PALMDQ9NP74 551 aa11.67□□□□□ -0.54
VARS-219ENST00000461328 K7EIM0 57 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 IGHV4-30-4P0DP06 118 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 ANXA3P12429 323 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 EDN2P20800 178 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 CD300EQ496F6 205 aaPredicted RBP11.66□□□□□ -0.54
VARS-219ENST00000461328 TRIQKQ629K1 86 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
VARS-219ENST00000461328 Q8N1Y9 231 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 UFC1Q9Y3C8 167 aa11.66□□□□□ -0.54
VARS-219ENST00000461328 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms