RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KIF13AQ9H1H9 1805 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 TMEM238C9JI98 176 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 GAGE2EQ4V326 116 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 OR13A1Q8NGR1 328 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 FNDC4Q9H6D8 234 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 GSN-AS1Q9NRJ2 163 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 GAGE2DQ9UEU5 116 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 LINC00312Q9Y6C7 94 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 PRR32B1ATL7 298 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 CCL20P78556 96 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 HSD52Q0P140 79 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 DTX1Q86Y01 620 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 FAM181AQ8N9Y4 354 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MGST2Q99735 147 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 PKD1L3Q7Z443 1732 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 KLF4O43474 513 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 SEC11AP67812 179 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 SLC22A18ASQ8N1D0 253 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 S4R3C0 116 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 IGKV1-8A0A0C4DH67 115 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 LINC00158P58513 81 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 NRN1LQ496H8 165 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 TMEM144Q7Z5S9 345 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 LINC01560Q8TB33 94 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 JPT2Q9H910 190 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 NRXN3Q9Y4C0 1643 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 IGKV1D-42A0A075B6H8 117 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 C17orf98A8MV24 154 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 SERF1AO75920 110 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 WISP3O95389 354 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-205ENST00000461221 ZNF479Q96JC4 524 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 PRSS22Q9GZN4 317 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 OSTCQ9NRP0 149 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 F2Z2F3 143 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 NBR2O15453 112 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 SLX4Q8IY92 1834 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 PROB1E7EW31 1015 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
BRCA1-205ENST00000461221 OVOL1O14753 267 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 ZNF525Q8N782 197 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 USP54Q70EL1 1684 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 VWC2LB2RUY7 222 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 GFRA3O60609 400 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 FOXL2P58012 376 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 TMEM249Q2WGJ8 235 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 OR9G4Q8NGQ1 327 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 SAP25Q8TEE9 199 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 C7orf69Q9H7B7 122 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 MYO5AQ9Y4I1 1855 aaKnown RBP7.56□□□□□ -1.2
BRCA1-205ENST00000461221 ADMP35318 185 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
BRCA1-205ENST00000461221 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 MYH14Q7Z406 1995 aaKnown RBP7.56□□□□□ -1.2
BRCA1-205ENST00000461221 UPK2O00526 184 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 LINC01590Q5TEZ4 76 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 BTAF1O14981 1849 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 TRAV14DV4A0A0A6YYC5 116 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 A0A1W2PRX2 142 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 IGLV3-21P80748 117 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-205ENST00000461221 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-205ENST00000461221 UBE2DNLQ8IWF7 75 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
BRCA1-205ENST00000461221 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
BRCA1-205ENST00000461221 IFITM2Q01629 132 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 RNF125Q96EQ8 232 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 MSGN1A6NI15 193 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 A0A1W2PRE2 83 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 CECR9P0C854 216 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 SP7Q8TDD2 431 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-205ENST00000461221 GNB1LQ9BYB4 327 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 LAMTOR3Q9UHA4 124 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 PSG8Q9UQ74 426 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 DOCK1Q14185 1865 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 IGHV3-11P01762 117 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 GFI1BQ5VTD9 330 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 FAM216BQ8N7L0 139 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 CNTRLQ7Z7A1 2325 aa7.55□□□□□ -1.2
BRCA1-205ENST00000461221 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 ABHD17AQ96GS6 310 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 PAPPAQ13219 1627 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 SMIM10L1P0DMW3 83 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 RASL10AQ92737 203 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 SMIM10Q96HG1 83 aa7.54□□□□□ -1.2
BRCA1-205ENST00000461221 C15orf61A6NNL5 157 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms