RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 COL7A1Q02388 2944 aa17.11■□□□□ 0.33
TRAF4-207ENST00000461195 LGALS9O00182 355 aa17.1■□□□□ 0.33
TRAF4-207ENST00000461195 HSPE1P61604 102 aaKnown RBP17.1■□□□□ 0.33
TRAF4-207ENST00000461195 PRCDQ00LT1 54 aa17.1■□□□□ 0.33
TRAF4-207ENST00000461195 C5orf66Q9H5L9 145 aa17.1■□□□□ 0.33
TRAF4-207ENST00000461195 SCP2D1Q9UJQ7 156 aa17.1■□□□□ 0.33
TRAF4-207ENST00000461195 GPR132Q9UNW8 380 aa17.1■□□□□ 0.33
TRAF4-207ENST00000461195 TEX13DA0A0J9YY54 714 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-207ENST00000461195 P0C879 139 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 MFAP2P55001 183 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 IZUMO4Q1ZYL8 232 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 FAM106AQ4KMX7 169 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 PYDC2Q56P42 97 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 NAA60Q9H7X0 242 aa17.09■□□□□ 0.33
TRAF4-207ENST00000461195 OR5AC1P0C628 307 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 GPR183P32249 361 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 LCN12Q6JVE5 192 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 Q8N402 240 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 OR2C3Q8N628 320 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 OR1P1Q8NH06 330 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 RRNAD1Q96FB5 475 aaKnown RBP17.08■□□□□ 0.32
TRAF4-207ENST00000461195 TMEM222Q9H0R3 208 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 MCUBQ9NWR8 336 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 V9GYH0 126 aa17.08■□□□□ 0.32
TRAF4-207ENST00000461195 C2orf70A6NJV1 201 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 NHLRC4P0CG21 123 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-207ENST00000461195 PLET1Q6UQ28 207 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 ADAMTSL5Q6ZMM2 481 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 OR2K2Q8NGT1 345 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 RNASE11Q8TAA1 199 aaKnown RBP17.07■□□□□ 0.32
TRAF4-207ENST00000461195 SCGB3A2Q96PL1 93 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 PLEKHA3Q9HB20 300 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 ZC4H2Q9NQZ6 224 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 DNAH9Q9NYC9 4486 aa17.07■□□□□ 0.32
TRAF4-207ENST00000461195 A0A0B4J293 547 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 ZNF320A2RRD8 509 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 CRYM-AS1A6NIL9 109 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 CDS2O95674 445 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 FOLR2P14207 255 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 FAUP35544 74 aaKnown RBP17.06■□□□□ 0.32
TRAF4-207ENST00000461195 ERHP84090 104 aaKnown RBP17.06■□□□□ 0.32
TRAF4-207ENST00000461195 DHODHQ02127 395 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 C11orf87Q6NUJ2 197 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 DYNLRB2Q8TF09 96 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 GLYATL2Q8WU03 294 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 C21orf62Q9NYP8 219 aa17.06■□□□□ 0.32
TRAF4-207ENST00000461195 IGHV3-21A0A0B4J1V1 117 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 AP3S2P59780 193 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 ZNF79Q15937 498 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 CCDC190Q86UF4 302 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 ZNF114Q8NC26 417 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 SCARB1Q8WTV0 552 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 TRIM63Q969Q1 353 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 ATP6V0BQ99437 205 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 PDCD10Q9BUL8 212 aa17.05■□□□□ 0.32
TRAF4-207ENST00000461195 IZUMO1RA6ND01 250 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 OR2T8A6NH00 312 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 A8MWP6 167 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 K7EIM0 57 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 ST8SIA3O43173 380 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 TGOLN2O43493 480 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 IFNA17P01571 189 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 KLF9Q13886 244 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-207ENST00000461195 SPINK9Q5DT21 86 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 FAM219AQ8IW50 185 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 SGPP2Q8IWX5 399 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 Q8N1Y9 231 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 TOMM5Q8N4H5 51 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 SLC35G3Q8N808 338 aa17.04■□□□□ 0.32
TRAF4-207ENST00000461195 RBPMSQ93062 196 aaKnown RBP17.04■□□□□ 0.32
TRAF4-207ENST00000461195 BSCL2Q96G97 398 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-207ENST00000461195 TECRQ9NZ01 308 aaKnown RBP17.04■□□□□ 0.32
TRAF4-207ENST00000461195 A0A0G2JRQ6 117 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 EDN2P20800 178 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 CBLN1P23435 193 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 DEFB114Q30KQ6 69 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 CD300EQ496F6 205 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-207ENST00000461195 SPANXN2Q5MJ10 180 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 SPSB3Q6PJ21 355 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 SELENOHQ8IZQ5 122 aaKnown RBP17.03■□□□□ 0.32
TRAF4-207ENST00000461195 LHFPL5Q8TAF8 219 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 MISP3Q96FF7 219 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 ASCL2Q99929 193 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 KCNIP3Q9Y2W7 256 aa17.03■□□□□ 0.32
TRAF4-207ENST00000461195 TENM3Q9P273 2699 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 IGHV3-35A0A0C4DH35 117 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 TMEM213A2RRL7 107 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 INS-IGF2F8WCM5 200 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 UNQ9165/PRO28630Q6UXU0 137 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 GTSCR1Q86UQ5 136 aa17.02■□□□□ 0.32
TRAF4-207ENST00000461195 ZNF436Q9C0F3 470 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-207ENST00000461195 FRMD6-AS1P0C7T7 363 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 SNCAP37840 140 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 ETV6P41212 452 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 Q56UQ5 140 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 TMEM268Q5VZI3 342 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 UBAC2Q8NBM4 344 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 CACNG8Q8WXS5 425 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 TMEM230Q96A57 120 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms