RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 C7orf77A4D0Y5 90 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 MT-CO2P00403 227 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 FOLR2P14207 255 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-205ENST00000460485 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
ERCC3-205ENST00000460485 COMPP49747 757 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-205ENST00000460485 CCL20P78556 96 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-205ENST00000460485 CDSNQ15517 529 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 RNF212Q495C1 297 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 WDR25Q64LD2 544 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-205ENST00000460485 LCN15Q6UWW0 184 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 KIR3DL3Q8N743 410 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 TEX45Q8NA69 505 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 RXFP4Q8TDU9 374 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 RPS10P5Q9NQ39 176 aa11.45□□□□□ -0.58
ERCC3-205ENST00000460485 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 TEX50A0A1B0GTY4 177 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 RRHO14718 337 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 MT-ND4LP03901 98 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 OR13C7P0DN81 318 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 RPS16P62249 146 aaKnown RBP11.44□□□□□ -0.58
ERCC3-205ENST00000460485 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 MMD2Q8IY49 270 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 PNKDQ8N490 385 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 RNASEH2CQ8TDP1 164 aaKnown RBP11.44□□□□□ -0.58
ERCC3-205ENST00000460485 RARRES2Q99969 163 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 VSIRQ9H7M9 311 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 NDUFA4L2Q9NRX3 87 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
ERCC3-205ENST00000460485 A0A1B0GV50 99 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 H3BQ15 152 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 CA2P00918 260 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 COL8A2P25067 703 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 CEACAM3P40198 252 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 RHOBP62745 196 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 UTF1Q5T230 341 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 TMEM144Q7Z5S9 345 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 CYB561D1Q8N8Q1 229 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 RNF2Q99496 336 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
ERCC3-205ENST00000460485 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 PATZ1Q9HBE1 687 aaKnown RBP11.43□□□□□ -0.58
ERCC3-205ENST00000460485 TMEM242Q9NWH2 141 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 PXMP4Q9Y6I8 212 aa11.43□□□□□ -0.58
ERCC3-205ENST00000460485 CORTO00230 105 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
ERCC3-205ENST00000460485 PDE6DO43924 150 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-205ENST00000460485 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
ERCC3-205ENST00000460485 IGFBP2P18065 325 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 PAX2Q02962 417 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 HNF4GQ14541 408 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 TMEM88Q6PEY1 159 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 Q8N7P7 452 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 MGST2Q99735 147 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 GSX1Q9H4S2 264 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-205ENST00000460485 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
ERCC3-205ENST00000460485 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 SRRM4A7MD48 611 aaKnown RBP11.41□□□□□ -0.58
ERCC3-205ENST00000460485 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 F6UZH7 168 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 CXorf1O96002 111 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
ERCC3-205ENST00000460485 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 CTDSP1Q9GZU7 261 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 MLXQ9UH92 298 aa11.41□□□□□ -0.58
ERCC3-205ENST00000460485 TNCP24821 2201 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 A6NNC1 897 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 TGOLN2O43493 480 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 VENTXO95231 258 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 RAB5BP61020 215 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 B2MP61769 119 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 CD69Q07108 199 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms