RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 IZUMO4Q1ZYL8 232 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 SELENOHQ8IZQ5 122 aaKnown RBP16.75■□□□□ 0.27
SSNA1-202ENST00000459860 SLC35G3Q8N808 338 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 OR1L6Q8NGR2 347 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 DLX4Q92988 240 aaPredicted RBP16.75■□□□□ 0.27
SSNA1-202ENST00000459860 CXorf58Q96LI9 332 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 ZMAT5Q9UDW3 170 aaKnown RBP16.75■□□□□ 0.27
SSNA1-202ENST00000459860 NOTCH3Q9UM47 2321 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 NDUFB8O95169 186 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 IFNA17P01571 189 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 TMEM187Q14656 261 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 RPEL1Q2QD12 228 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 KLK9Q2XQG4 91 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 TMEM128Q5BJH2 165 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 CENPSQ8N2Z9 138 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 LHFPL5Q8TAF8 219 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 CCDC32Q9BV29 185 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 KLK9Q9UKQ9 250 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 F11RQ9Y624 299 aaKnown RBP16.74■□□□□ 0.27
SSNA1-202ENST00000459860 TMEM56-RWDD3S4R434 201 aa16.74■□□□□ 0.27
SSNA1-202ENST00000459860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
SSNA1-202ENST00000459860 VAMP1P23763 118 aa16.73■□□□□ 0.27
SSNA1-202ENST00000459860 CCR6P51684 374 aa16.73■□□□□ 0.27
SSNA1-202ENST00000459860 ERHP84090 104 aaKnown RBP16.73■□□□□ 0.27
SSNA1-202ENST00000459860 TATDN3Q17R31 274 aa16.73■□□□□ 0.27
SSNA1-202ENST00000459860 SLC25A24Q6NUK1 477 aa16.73■□□□□ 0.27
SSNA1-202ENST00000459860 LGI3Q8N145 548 aa16.73■□□□□ 0.27
SSNA1-202ENST00000459860 A0A0B4J293 547 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 ST8SIA3O43173 380 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 INSL3P51460 131 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 SUPT4H1P63272 117 aaKnown RBP16.72■□□□□ 0.27
SSNA1-202ENST00000459860 REC114Q7Z4M0 266 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 ELOVL1Q9BW60 279 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 ENY2Q9NPA8 101 aa16.72■□□□□ 0.27
SSNA1-202ENST00000459860 TRBV7-1A0A0A6YYK4 115 aa16.71■□□□□ 0.27
SSNA1-202ENST00000459860 A0A0G2JRQ6 117 aa16.71■□□□□ 0.27
SSNA1-202ENST00000459860 NDUFB6O95139 128 aa16.71■□□□□ 0.27
SSNA1-202ENST00000459860 TRBV12-3P01733 135 aa16.71■□□□□ 0.27
SSNA1-202ENST00000459860 HOXA1P49639 335 aaPredicted RBP16.71■□□□□ 0.27
SSNA1-202ENST00000459860 WDR12Q9GZL7 423 aaKnown RBP16.71■□□□□ 0.27
SSNA1-202ENST00000459860 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.71■□□□□ 0.27
SSNA1-202ENST00000459860 CACNG5Q9UF02 275 aa16.71■□□□□ 0.27
SSNA1-202ENST00000459860 A0A0B4J2A0 478 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 SAP30O75446 220 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 UBE2MP61081 183 aaKnown RBP16.7■□□□□ 0.26
SSNA1-202ENST00000459860 SPINK9Q5DT21 86 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 OR2C3Q8N628 320 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 OR1P1Q8NH06 330 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 PRR13Q9NZ81 148 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 CACFD1Q9UGQ2 172 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 SHPKQ9UHJ6 478 aa16.7■□□□□ 0.26
SSNA1-202ENST00000459860 IGHV3-23P01764 117 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 ARL3P36405 182 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 SNCAP37840 140 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 EGFEM1PQ0D2K5 195 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 CLEC19AQ6UXS0 136 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 ZNF114Q8NC26 417 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 VN1R17PQ8TDU5 208 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 GPR146Q96CH1 333 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 OR4C12Q96R67 309 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 S4R3C0 116 aa16.69■□□□□ 0.26
SSNA1-202ENST00000459860 DUXBA0A1W2PPF3 345 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 MFSD2BA6NFX1 497 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 BMPR1BO00238 502 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 LYRM1O43325 122 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 GGCTO75223 188 aaKnown RBP16.68■□□□□ 0.26
SSNA1-202ENST00000459860 SULT1A3P0DMM9 295 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 SULT1A4P0DMN0 295 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 SYNJ2BPP57105 145 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 SPCS3P61009 180 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 KLF5Q13887 457 aaPredicted RBP16.68■□□□□ 0.26
SSNA1-202ENST00000459860 ZNF846Q147U1 533 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 ACSM6Q6P461 480 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 OR52E5Q8NH55 327 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 CCDC140Q96MF4 163 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 DMRT1Q9Y5R6 373 aa16.68■□□□□ 0.26
SSNA1-202ENST00000459860 PPP5D1E7EU14 171 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 SFT2D2O95562 160 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 SUB1P53999 127 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSNA1-202ENST00000459860 PPP1R1AQ13522 171 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 Q6ZRM9 215 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 LYZL2Q7Z4W2 148 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 MISP3Q96FF7 219 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 AURKAIP1Q9NWT8 199 aaPredicted RBP16.67■□□□□ 0.26
SSNA1-202ENST00000459860 PEMTQ9UBM1 199 aa16.67■□□□□ 0.26
SSNA1-202ENST00000459860 INS-IGF2F8WCM5 200 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 BTCP35070 178 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 MFAP2P55001 183 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 AARDQ4LEZ3 155 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 OR9G4Q8NGQ1 327 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 ZNF502Q8TBZ5 544 aa16.66■□□□□ 0.26
SSNA1-202ENST00000459860 KMT2CQ8NEZ4 4911 aaKnown RBP16.65■□□□□ 0.26
SSNA1-202ENST00000459860 HLA-AP01891 365 aaKnown RBP16.65■□□□□ 0.26
SSNA1-202ENST00000459860 GPR183P32249 361 aa16.65■□□□□ 0.26
SSNA1-202ENST00000459860 SMCO1Q147U7 214 aa16.65■□□□□ 0.26
SSNA1-202ENST00000459860 NMSQ5H8A3 153 aa16.65■□□□□ 0.26
SSNA1-202ENST00000459860 LRTM2Q8N967 370 aa16.65■□□□□ 0.26
SSNA1-202ENST00000459860 C21orf62Q9NYP8 219 aa16.65■□□□□ 0.26
SSNA1-202ENST00000459860 CEBPZOSA8MTT3 80 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 CORTO00230 105 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms