RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SUB1P53999 127 aaKnown RBP eCLIP19.44■□□□□ 0.7
U2AF1-204ENST00000459639 TUSC1Q2TAM9 212 aa19.44■□□□□ 0.7
U2AF1-204ENST00000459639 CYB5R2Q6BCY4 276 aa19.44■□□□□ 0.7
U2AF1-204ENST00000459639 TAF15Q92804 592 aaKnown RBP eCLIP19.44■□□□□ 0.7
U2AF1-204ENST00000459639 PLA2G2EQ9NZK7 142 aa19.44■□□□□ 0.7
U2AF1-204ENST00000459639 TEX22C9J3V5 150 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 ATP6V1G1O75348 118 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 FBP1P09467 338 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 ZNF114Q8NC26 417 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 OR2G3Q8NGZ4 309 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 PSMG3Q9BT73 122 aaPredicted RBP19.43■□□□□ 0.7
U2AF1-204ENST00000459639 VPS13CQ709C8 3753 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 FNDC10F2Z333 226 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 CNIH1O95406 144 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 MDKP21741 143 aaPredicted RBP19.43■□□□□ 0.7
U2AF1-204ENST00000459639 RAB5CP51148 216 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 Q8N9W7 124 aa19.43■□□□□ 0.7
U2AF1-204ENST00000459639 SAT2Q96F10 170 aaPredicted RBP19.43■□□□□ 0.7
U2AF1-204ENST00000459639 CXorf58Q96LI9 332 aa19.42■□□□□ 0.7
U2AF1-204ENST00000459639 P2RX4Q99571 388 aa19.42■□□□□ 0.7
U2AF1-204ENST00000459639 TIMM9Q9Y5J7 89 aa19.42■□□□□ 0.7
U2AF1-204ENST00000459639 NAV3Q8IVL0 2385 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 ZNF705EA8MWA4 302 aaPredicted RBP19.41■□□□□ 0.7
U2AF1-204ENST00000459639 UMAD1C9J7I0 102 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 FGF7P21781 194 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 FXYD3Q14802 87 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 ZNF562Q6V9R5 426 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 TMEM182Q6ZP80 229 aaPredicted RBP19.41■□□□□ 0.7
U2AF1-204ENST00000459639 RSG1Q9BU20 258 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 MED9Q9NWA0 146 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 WDR83OSQ9Y284 106 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 UNC79Q9P2D8 2635 aa19.41■□□□□ 0.7
U2AF1-204ENST00000459639 FSHBP01225 129 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 AREGP15514 252 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 PIFOQ8TCI5 191 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 RNASEH2CQ8TDP1 164 aaKnown RBP19.4■□□□□ 0.7
U2AF1-204ENST00000459639 TRIM77I1YAP6 450 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 HLA-DRB1P01911 266 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 AANATQ16613 207 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 PVRIGQ6DKI7 326 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 CENPVQ7Z7K6 275 aaPredicted RBP19.4■□□□□ 0.7
U2AF1-204ENST00000459639 SSMEM1Q8WWF3 244 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 RFNGQ9Y644 331 aa19.4■□□□□ 0.7
U2AF1-204ENST00000459639 CREBBPQ92793 2442 aa19.39■□□□□ 0.7
U2AF1-204ENST00000459639 SMCO3A2RU48 225 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 MPDU1O75352 247 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 REG1AP05451 166 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 BLOC1S1P78537 153 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 ARSJQ5FYB0 599 aaPredicted RBP19.39■□□□□ 0.69
U2AF1-204ENST00000459639 ARPC1AQ92747 370 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 SSX3Q99909 188 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 RASL11BQ9BPW5 248 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 PDZD2O15018 2839 aa19.39■□□□□ 0.69
U2AF1-204ENST00000459639 CX3CL1P78423 397 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 SERF2P84101 59 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 CD69Q07108 199 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 BTNL8Q6UX41 500 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 TREML4Q6UXN2 200 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 ABHD5Q8WTS1 349 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 RBM14Q96PK6 669 aaKnown RBP19.38■□□□□ 0.69
U2AF1-204ENST00000459639 NPCDR1Q9BY65 106 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 NPVFQ9HCQ7 196 aa19.38■□□□□ 0.69
U2AF1-204ENST00000459639 NBPF19A0A087WUL8 3843 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 MAP1AP78559 2803 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-204ENST00000459639 OR1P1Q8NH06 330 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 NANPQ8TBE9 248 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 CACNG8Q8WXS5 425 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 SLC25A33Q9BSK2 321 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 PARP11Q9NR21 331 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 PFDN2Q9UHV9 154 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 MOB4Q9Y3A3 225 aa19.37■□□□□ 0.69
U2AF1-204ENST00000459639 SOX21Q9Y651 276 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-204ENST00000459639 PRH1P02810 166 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 GPX4P36969 197 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-204ENST00000459639 AKR1C8PQ5T2L2 129 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 Q6ZRG5 221 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 COMMD7Q86VX2 200 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 CIARTQ8N365 385 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-204ENST00000459639 FBXO7Q9Y3I1 522 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 F11RQ9Y624 299 aaKnown RBP19.36■□□□□ 0.69
U2AF1-204ENST00000459639 C17orf112F2Z3M2 114 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 APELAP0DMC3 54 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 CAMLGP49069 296 aa19.36■□□□□ 0.69
U2AF1-204ENST00000459639 FASNP49327 2511 aaKnown RBP19.36■□□□□ 0.69
U2AF1-204ENST00000459639 IGHV7-81A0A0B4J1V7 117 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 CORTO00230 105 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 NDPQ00604 133 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 AKR1C1Q04828 323 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 PXDC1Q5TGL8 231 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 DPPA3Q6W0C5 159 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 C9orf139Q6ZV77 190 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 SLC16A13Q7RTY0 426 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 C5orf56Q8N8D9 126 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 ZNF709Q8N972 641 aa19.35■□□□□ 0.69
U2AF1-204ENST00000459639 LSM4Q9Y4Z0 139 aaKnown RBP19.35■□□□□ 0.69
U2AF1-204ENST00000459639 H3BUX3 64 aa19.34■□□□□ 0.69
U2AF1-204ENST00000459639 ABCA1O95477 2261 aa19.34■□□□□ 0.69
U2AF1-204ENST00000459639 SOX15O60248 233 aa19.33■□□□□ 0.69
U2AF1-204ENST00000459639 CTRB1P17538 263 aa19.33■□□□□ 0.69
U2AF1-204ENST00000459639 CTRB2Q6GPI1 263 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms