RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CLEC3BP05452 202 aa14.25□□□□□ -0.13
USP39-209ENST00000458268 FAUP35544 74 aaKnown RBP14.25□□□□□ -0.13
USP39-209ENST00000458268 ZNF57Q68EA5 555 aaPredicted RBP14.25□□□□□ -0.13
USP39-209ENST00000458268 PLEKHA3Q9HB20 300 aa14.25□□□□□ -0.13
USP39-209ENST00000458268 PRR13Q9NZ81 148 aa14.25□□□□□ -0.13
USP39-209ENST00000458268 F11RQ9Y624 299 aaKnown RBP14.25□□□□□ -0.13
USP39-209ENST00000458268 TRBV7-1A0A0A6YYK4 115 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 ZNF701M0R085 212 aaPredicted RBP14.24□□□□□ -0.13
USP39-209ENST00000458268 IGLV1-51P01701 117 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 CSN3P07498 182 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 FGF2P09038 288 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 AKR1C4P17516 323 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 EDN2P20800 178 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 UCP1P25874 307 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 INPP1P49441 399 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 HOXA1P49639 335 aaPredicted RBP14.24□□□□□ -0.13
USP39-209ENST00000458268 MFAP2P55001 183 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 SURF2Q15527 256 aaPredicted RBP14.24□□□□□ -0.13
USP39-209ENST00000458268 FAM209BQ5JX69 171 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 ASCL2Q99929 193 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 GPR132Q9UNW8 380 aa14.24□□□□□ -0.13
USP39-209ENST00000458268 A0A0G2JRQ6 117 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 OR2T8A6NH00 312 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 AP3S2P59780 193 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 HSPE1P61604 102 aaKnown RBP14.23□□□□□ -0.13
USP39-209ENST00000458268 PRCDQ00LT1 54 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 ZNF79Q15937 498 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 Q56UQ5 140 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 TMEM268Q5VZI3 342 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 PLET1Q6UQ28 207 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 TMED4Q7Z7H5 227 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 CCDC190Q86UF4 302 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 SGPP2Q8IWX5 399 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 ZNF502Q8TBZ5 544 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 PINX1Q96BK5 328 aaKnown RBP14.23□□□□□ -0.13
USP39-209ENST00000458268 TMEM222Q9H0R3 208 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 SMAD5-AS1Q9Y6J3 95 aa14.23□□□□□ -0.13
USP39-209ENST00000458268 LINC00854A0A1B0GVQ3 168 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 CRYM-AS1A6NIL9 109 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 ST8SIA3O43173 380 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 NXPH3O95157 252 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 IGHV3-48P01763 117 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 ERHP84090 104 aaKnown RBP14.22□□□□□ -0.13
USP39-209ENST00000458268 KLF9Q13886 244 aaPredicted RBP14.22□□□□□ -0.13
USP39-209ENST00000458268 FAM106AQ4KMX7 169 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 C11orf87Q6NUJ2 197 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 IL34Q6ZMJ4 242 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 LHFPL5Q8TAF8 219 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 CACNG8Q8WXS5 425 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 TRIM63Q969Q1 353 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 SCGB3A2Q96PL1 93 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 B9D2Q9BPU9 175 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 ENY2Q9NPA8 101 aa14.22□□□□□ -0.13
USP39-209ENST00000458268 LSM4Q9Y4Z0 139 aaKnown RBP14.22□□□□□ -0.13
USP39-209ENST00000458268 A0A0B4J293 547 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 ETV6P41212 452 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 DHODHQ02127 395 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 CADM3Q8N126 398 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 OR2C3Q8N628 320 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 SLC2A8Q9NY64 477 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 C21orf62Q9NYP8 219 aa14.21□□□□□ -0.13
USP39-209ENST00000458268 IZUMO1RA6ND01 250 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 C2orf70A6NJV1 201 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 B3GALNT1O75752 331 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 SNCAP37840 140 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 TRIQKQ629K1 86 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 LCN12Q6JVE5 192 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 SELENOHQ8IZQ5 122 aaKnown RBP14.2□□□□□ -0.14
USP39-209ENST00000458268 VN1R17PQ8TDU5 208 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 GLYATL2Q8WU03 294 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 RBPMSQ93062 196 aaKnown RBP14.2□□□□□ -0.14
USP39-209ENST00000458268 TMEM230Q96A57 120 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 KCNIP3Q9Y2W7 256 aa14.2□□□□□ -0.14
USP39-209ENST00000458268 IGHV3OR16-8A0A075B7F1 116 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 TGOLN2O43493 480 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 FOLR2P14207 255 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 GUCA2BQ16661 112 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 OR1L6Q8NGR2 347 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 OR1P1Q8NH06 330 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 SCARB1Q8WTV0 552 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 CACNG5Q9UF02 275 aa14.19□□□□□ -0.14
USP39-209ENST00000458268 K7EIM0 57 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 CDS2O95674 445 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 P0C879 139 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 KLK9Q2XQG4 91 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 CD300EQ496F6 205 aaPredicted RBP14.18□□□□□ -0.14
USP39-209ENST00000458268 TM4SF20Q53R12 229 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 UNQ9165/PRO28630Q6UXU0 137 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 GPHB5Q86YW7 130 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 GPR146Q96CH1 333 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 C20orf24Q9BUV8 137 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 SRRQ9GZT4 340 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 KLK9Q9UKQ9 250 aa14.18□□□□□ -0.14
USP39-209ENST00000458268 ZNF207O43670 478 aaKnown RBP14.17□□□□□ -0.14
USP39-209ENST00000458268 MT-CO2P00403 227 aa14.17□□□□□ -0.14
USP39-209ENST00000458268 VAMP1P23763 118 aa14.17□□□□□ -0.14
USP39-209ENST00000458268 ADAMTSL5Q6ZMM2 481 aa14.17□□□□□ -0.14
USP39-209ENST00000458268 Q6ZRM9 215 aa14.17□□□□□ -0.14
USP39-209ENST00000458268 GTSCR1Q86UQ5 136 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms