RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 TMEM68Q96MH6 324 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 RBM14Q96PK6 669 aaKnown RBP7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 HINT2Q9BX68 163 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 SLC25A32Q9H2D1 315 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 FBXL15Q9H469 300 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 KCNIP2Q9NS61 270 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 MOB4Q9Y3A3 225 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 NOTCH2Q04721 2471 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 PDZD2O15018 2839 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 CSPG4Q6UVK1 2322 aa7.11□□□□□ -1.27
CDC42EP3-204ENST00000457889 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 NCBP2LA6PVI3 153 aaKnown RBP7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 PMS2P5A8MQ11 134 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CD5LO43866 347 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CNIH1O95406 144 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CA2P00918 260 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 SPP1P10451 314 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CD33P20138 364 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CNTFRP26992 372 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 PJVKQ0ZLH3 352 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 HNF4GQ14541 408 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 CLINT1Q14677 625 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 SPINK9Q5DT21 86 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 PVRIGQ6DKI7 326 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 OR8G2PQ6IF36 304 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 SLC25A24Q6NUK1 477 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 BRD3OSQ6XYD6 125 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 OR1P1Q8NH06 330 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 SCGB1C1Q8TD33 95 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 RNF141Q8WVD5 230 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 ARPC1AQ92747 370 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 RASL11BQ9BPW5 248 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 SMIM3Q9BZL3 60 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 PRDM13Q9H4Q3 707 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 TIMM9Q9Y5J7 89 aa7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 FLNAP21333 2647 aaKnown RBP7.1□□□□□ -1.27
CDC42EP3-204ENST00000457889 RPS10-NUDT3A0A1W2PQS6 291 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 BTBD17A6NE02 478 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 TRIM77I1YAP6 450 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 CFDP00746 253 aaPredicted RBP7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 OR13C7P0DN81 318 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 RNASE2P10153 161 aaKnown RBP7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 HNF1AP20823 631 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 GNB1P62873 340 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 SERF2P84101 59 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 FXYD3Q14802 87 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 CLLU1Q5K131 121 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 HAPLN4Q86UW8 402 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 Q8N9W7 124 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 MAPK1IP1LQ8NDC0 245 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 SSX3Q99909 188 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 SLC25A33Q9BSK2 321 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 WDR61Q9GZS3 305 aaKnown RBP7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 WFDC1Q9HC57 220 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 TMEM160Q9NX00 188 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 ZNF580Q9UK33 172 aa7.09□□□□□ -1.27
CDC42EP3-204ENST00000457889 TET2Q6N021 2002 aaPredicted RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 ZANQ9Y493 2812 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 IGHV3OR16-10A0A075B7F0 116 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 A6NDX4 124 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 NPIPB5A8MRT5 1133 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 C17orf112F2Z3M2 114 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 OPN1MWP04001 364 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 OPN1MW2P0DN77 364 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 OPN1MW3P0DN78 364 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 CD24P25063 80 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 CX3CL1P78423 397 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 SSBP2P81877 361 aaPredicted RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 ARL16Q0P5N6 197 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 RAB31Q13636 194 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 C10orf55Q5SWW7 151 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 CENPVQ7Z7K6 275 aaPredicted RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 C5orf56Q8N8D9 126 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 ZNF709Q8N972 641 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 OR2G3Q8NGZ4 309 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 PIFOQ8TCI5 191 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 TMED6Q8WW62 240 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 SSMEM1Q8WWF3 244 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 C22orf15Q8WYQ4 148 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 TAF15Q92804 592 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 SAT2Q96F10 170 aaPredicted RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 BSCL2Q96G97 398 aaPredicted RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 NPVFQ9HCQ7 196 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 FBXO7Q9Y3I1 522 aa7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
CDC42EP3-204ENST00000457889 IGHV7-81A0A0B4J1V7 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms