RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF718Q3SXZ3 478 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 AMTNQ6UX39 209 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 PCP2Q8IVA1 136 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR4B1Q8NGF8 309 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 CPT1CQ8TCG5 803 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 LRRC29Q8WV35 223 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 ITLN1Q8WWA0 313 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 SRSF8Q9BRL6 282 aaKnown RBP3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 DLL3Q9NYJ7 618 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 C19orf25Q9UFG5 118 aaPredicted RBP3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 SMPXQ9UHP9 88 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 HILPDAQ9Y5L2 63 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 TRAV5A0A0B4J249 113 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR9G9P0C7N8 305 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 GABRG2P18507 467 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 EFNB3Q15768 340 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 TMEM211Q6ICI0 200 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 RHBDD2Q6NTF9 364 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 PQLC2Q6ZP29 291 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 C5orf17Q8NAS9 161 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR56B2PQ8NGI1 322 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR4P4Q8NGL7 312 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 POM121L2Q96KW2 1035 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 CHRNA10Q9GZZ6 450 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 MS4A5Q9H3V2 200 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 CHCHD2Q9Y6H1 151 aaPredicted RBP3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 TRAV9-2A0A087WT02 112 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 C5orf49A4QMS7 147 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF716A6NP11 495 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 NPIPA2E9PIF3 369 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 WNT9BO14905 357 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CIDEAO60543 219 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 NEURL1O76050 574 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CLDN1O95832 211 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 SLC25A6P12236 298 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM27BQ5VT28 67 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 RAET1LQ5VY80 246 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 TMEM186Q96B77 213 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 SCGB3A2Q96PL1 93 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 KMT2BQ9UMN6 2715 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 IGSF10Q6WRI0 2623 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 TRAV8-1A0A0A6YYK1 113 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 C21orf140B9A014 251 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 LINC01565O15544 149 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CCL3P10147 92 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 WT1P19544 449 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CENPWQ5EE01 88 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF439Q8NDP4 499 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF296Q8WUU4 475 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 BADQ92934 168 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 C20orf78Q9BR46 151 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 IL36BQ9NZH7 164 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 OR2W1Q9Y3N9 320 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 SAA2-SAA4A0A096LPE2 208 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 EPOPA6NHQ4 379 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 PRSS29PA6NIE9 313 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 GJE1A6NN92 205 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 GFRA3O60609 400 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 AZU1P20160 251 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 GPM6AP51674 278 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF90Q03938 601 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF816Q0VGE8 651 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF808Q8N4W9 903 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 OR9G1Q8NH87 305 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 DDB2Q92466 427 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 A0A096LPE4 126 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 A0A1W2PPZ6 126 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 HOXA2O43364 376 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CD99P14209 185 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 TM4SF4P48230 202 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 MIR17HGQ75NE6 70 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 RAB42Q8N4Z0 105 aa3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 CDX2Q99626 313 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 PHF7Q9BWX1 381 aaPredicted RBP3.7□□□□□ -1.82
DEPDC1-202ENST00000456315 OR4C46A6NHA9 309 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 LRRC30A6NM36 301 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 MGST3O14880 152 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 FSTL3O95633 263 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SERPINE2P07093 398 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF16P17020 682 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PSMB3P49720 205 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 CAMPP49913 170 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 CRYBA4P53673 196 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 MFAP2P55001 183 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 CLDN18P56856 261 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 HERV-K104P61576 105 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 SUMO1P63165 101 aaKnown RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ETDBQ3ZM63 59 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 Q6P435 159 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 Q6ZS49 121 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 GJC3Q8NFK1 279 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 PERPQ96FX8 193 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 RAB40CQ96S21 281 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 COMMD5Q9GZQ3 224 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 ISLRO14498 428 aa3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 TLX3O43711 291 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1-202ENST00000456315 UQCRFS1P47985 274 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms