RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 BORCS5Q969J3 196 aa13.86□□□□□ -0.19
COL20A1-204ENST00000455906 LSM10Q969L4 123 aaKnown RBP13.86□□□□□ -0.19
COL20A1-204ENST00000455906 MOB3AQ96BX8 217 aa13.86□□□□□ -0.19
COL20A1-204ENST00000455906 RNF183Q96D59 192 aa13.86□□□□□ -0.19
COL20A1-204ENST00000455906 C21orf62Q9NYP8 219 aa13.86□□□□□ -0.19
COL20A1-204ENST00000455906 NSG2Q9Y328 171 aa13.86□□□□□ -0.19
COL20A1-204ENST00000455906 IGHV3OR16-8A0A075B7F1 116 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 K7EMT4 169 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 LPAR6P43657 344 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 CEMP1Q6PRD7 247 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-204ENST00000455906 ZNF2Q9BSG1 426 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-204ENST00000455906 HINT2Q9BX68 163 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 NAA50Q9GZZ1 169 aaKnown RBP13.85□□□□□ -0.19
COL20A1-204ENST00000455906 IFT46Q9NQC8 304 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 OR51B2Q9Y5P1 312 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 DNAH6Q9C0G6 4158 aa13.85□□□□□ -0.19
COL20A1-204ENST00000455906 OR4C46A6NHA9 309 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 ZNF207O43670 478 aaKnown RBP13.84□□□□□ -0.19
COL20A1-204ENST00000455906 TMEM127O75204 238 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 KRASP01116 189 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 ATF4P18848 351 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-204ENST00000455906 G6PCP35575 357 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 RAB2BQ8WUD1 216 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
COL20A1-204ENST00000455906 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 FXYD6Q9H0Q3 95 aa13.84□□□□□ -0.19
COL20A1-204ENST00000455906 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 GABARAPO95166 117 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 PMP2P02689 132 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 CTSDP07339 412 aaPredicted RBP13.83□□□□□ -0.2
COL20A1-204ENST00000455906 CTSGP08311 255 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
COL20A1-204ENST00000455906 NAT1P18440 290 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 TGFBR1P36897 503 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 TMBIM6P55061 237 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 VBP1P61758 197 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 UBAC2Q8NBM4 344 aa13.83□□□□□ -0.2
COL20A1-204ENST00000455906 S100A16Q96FQ6 103 aaKnown RBP13.83□□□□□ -0.2
COL20A1-204ENST00000455906 C15orf62A8K5M9 175 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 NCS1P62166 190 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 Q56UQ5 140 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 GALNT14Q96FL9 552 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 BCL7BQ9BQE9 202 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 MAP6D1Q9H9H5 199 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 TMEM14BQ9NUH8 114 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 NDUFA13Q9P0J0 144 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 SMPXQ9UHP9 88 aa13.82□□□□□ -0.2
COL20A1-204ENST00000455906 GPR31O00270 319 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 SNAPC5O75971 98 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 TAS2R20P59543 309 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 CTF1Q16619 201 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 UBE2NLQ5JXB2 153 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 APRG1Q8IVJ8 170 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 OR1P1Q8NH06 330 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 OR5B3Q8NH48 314 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 RNF2Q99496 336 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
COL20A1-204ENST00000455906 HECTD4Q9Y4D8 3996 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 IGHV7-4-1A0A0J9YVY3 117 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 SMIM31A0A1B0GVY4 71 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 C15orf61A6NNL5 157 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 FCGR2BP31994 310 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-204ENST00000455906 TAS2R46P59540 309 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 ZNF124Q15973 351 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 TMEM69Q5SWH9 247 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 LYSMD2Q8IV50 215 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 CMTM1Q8IZ96 169 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 OR5H2Q8NGV7 314 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 TMEM56Q96MV1 263 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 FKBP11Q9NYL4 201 aa13.8□□□□□ -0.2
COL20A1-204ENST00000455906 I3L2K1 104 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 CHEK1O14757 476 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 CROCCP3Q8IVE0 287 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 SAMD12Q8N8I0 201 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 OR6F1Q8NGZ6 308 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 OR10C1Q96KK4 312 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 RHPN1-AS1Q9BWJ2 59 aa13.79□□□□□ -0.2
COL20A1-204ENST00000455906 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
COL20A1-204ENST00000455906 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-204ENST00000455906 HERC2O95714 4834 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 HRH1P35367 487 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 RPS19P39019 145 aaKnown RBP13.78□□□□□ -0.2
COL20A1-204ENST00000455906 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-204ENST00000455906 PHLDA2Q53GA4 152 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 TMEM217Q8N7C4 229 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 TMEM116Q8NCL8 245 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 SEC22AQ96IW7 307 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 TSC22D3Q99576 134 aa13.78□□□□□ -0.2
COL20A1-204ENST00000455906 IGHV3-49A0A0A0MS15 119 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 NUPL2O15504 423 aaKnown RBP13.77□□□□□ -0.21
COL20A1-204ENST00000455906 IGKV1-39P01597 117 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 IGKV1D-39P04432 117 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 PRSS3P35030 304 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 RPP25LQ8N5L8 163 aaKnown RBP13.77□□□□□ -0.21
COL20A1-204ENST00000455906 ZNF114Q8NC26 417 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
COL20A1-204ENST00000455906 SLC25A46Q96AG3 418 aa13.77□□□□□ -0.21
COL20A1-204ENST00000455906 CSTL1Q9H114 145 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms