RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 PPP5D1E7EU14 171 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 SPNP16150 400 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 PRCDQ00LT1 54 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 DHODHQ02127 395 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 KLF9Q13886 244 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-214ENST00000455548 ZNF79Q15937 498 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 CLEC19AQ6UXS0 136 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 TOMM5Q8N4H5 51 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 RNASE11Q8TAA1 199 aaKnown RBP12.41□□□□□ -0.42
SMPD4-214ENST00000455548 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 DMRT1Q9Y5R6 373 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 S4R3C0 116 aa12.41□□□□□ -0.42
SMPD4-214ENST00000455548 CDS2O95674 445 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 IGHV3-23P01764 117 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 OR5AC1P0C628 307 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 FAM106AQ4KMX7 169 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 IL34Q6ZMJ4 242 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 GPHB5Q86YW7 130 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 FAM219AQ8IW50 185 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 SGPP2Q8IWX5 399 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 ZNF502Q8TBZ5 544 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
SMPD4-214ENST00000455548 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 COL7A1Q02388 2944 aa12.4□□□□□ -0.42
SMPD4-214ENST00000455548 A0A0B4J293 547 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 OR2C1O95371 312 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 CSN3P07498 182 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 PLEKHA3Q9HB20 300 aa12.39□□□□□ -0.43
SMPD4-214ENST00000455548 LSM4Q9Y4Z0 139 aaKnown RBP12.39□□□□□ -0.43
SMPD4-214ENST00000455548 LGALS9O00182 355 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
SMPD4-214ENST00000455548 CLEC3BP05452 202 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 GP9P14770 177 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 MFAP2P55001 183 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 ERHP84090 104 aaKnown RBP12.38□□□□□ -0.43
SMPD4-214ENST00000455548 GALNT14Q96FL9 552 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 B9D2Q9BPU9 175 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 PDCD10Q9BUL8 212 aa12.38□□□□□ -0.43
SMPD4-214ENST00000455548 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 IFNA17P01571 189 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 GPR183P32249 361 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 CD69Q07108 199 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 HAPLN4Q86UW8 402 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 SELENOHQ8IZQ5 122 aaKnown RBP12.37□□□□□ -0.43
SMPD4-214ENST00000455548 ZNF114Q8NC26 417 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 OR2K2Q8NGT1 345 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 TMEM56-RWDD3S4R434 201 aa12.37□□□□□ -0.43
SMPD4-214ENST00000455548 A0A0G2JRQ6 117 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 INS-IGF2F8WCM5 200 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 TGOLN2O43493 480 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 ANXA3P12429 323 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 AKR1C4P17516 323 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 SNCAP37840 140 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 INPP1P49441 399 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 TMEM187Q14656 261 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-214ENST00000455548 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 PLET1Q6UQ28 207 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 BSCL2Q96G97 398 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-214ENST00000455548 SLC25A21Q9BQT8 299 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-214ENST00000455548 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-214ENST00000455548 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
SMPD4-214ENST00000455548 PIGBOS1A0A0B4J2F0 54 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 C2orf70A6NJV1 201 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 K7EIM0 57 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 SPCS3P61009 180 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 SRPXP78539 464 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 TRIQKQ629K1 86 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 MISP3Q96FF7 219 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
SMPD4-214ENST00000455548 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
SMPD4-214ENST00000455548 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 ZNF320A2RRD8 509 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 OR2T8A6NH00 312 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 A8MWP6 167 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 FOLR2P14207 255 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-214ENST00000455548 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMPD4-214ENST00000455548 SUPT4H1P63272 117 aaKnown RBP12.34□□□□□ -0.43
SMPD4-214ENST00000455548 Q6ZRM9 215 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 OR52E5Q8NH55 327 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 DYNLRB2Q8TF09 96 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms