RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SEC22AQ96IW7 307 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 RNF2Q99496 336 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
GPC1-206ENST00000455111 THYN1Q9P016 225 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 K7EMT4 169 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 TMEM127O75204 238 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 IGHV3-48P01763 117 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
GPC1-206ENST00000455111 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 PMS2P11Q13670 270 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 OR5H2Q8NGV7 314 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 SMPXQ9UHP9 88 aa11.83□□□□□ -0.52
GPC1-206ENST00000455111 IGHV3-49A0A0A0MS15 119 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 SPRY2O43597 315 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
GPC1-206ENST00000455111 ERVK-16P61578 105 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 NCS1P62166 190 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 Q6ZWC4 215 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
GPC1-206ENST00000455111 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 LILRB2Q8N423 598 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 SLC25A46Q96AG3 418 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 RNF183Q96D59 192 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 ATP6V0BQ99437 205 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
GPC1-206ENST00000455111 DNAH6Q9C0G6 4158 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 CHEK1O14757 476 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
GPC1-206ENST00000455111 PRSS3P35030 304 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 OR5B3Q8NH48 314 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 MAP6D1Q9H9H5 199 aa11.81□□□□□ -0.52
GPC1-206ENST00000455111 IGHV3OR16-13A0A075B7E8 117 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 IGHV3-74A0A0B4J1X5 117 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 IGHV7-4-1A0A0J9YVY3 117 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 C15orf62A8K5M9 175 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 P0C879 139 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 ELK1P19419 428 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 TAS2R46P59540 309 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 Q56UQ5 140 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 CROCCP3Q8IVE0 287 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 OR6F1Q8NGZ6 308 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 MRGPRFQ96AM1 343 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 HERC2O95714 4834 aa11.8□□□□□ -0.52
GPC1-206ENST00000455111 MT-CO2P00403 227 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 BMI1P35226 326 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 SPINK9Q5DT21 86 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 SLC38A6Q8IZM9 456 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 BORCS5Q969J3 196 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 RHPN1-AS1Q9BWJ2 59 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 NXF2Q9GZY0 626 aaKnown RBP11.79□□□□□ -0.52
GPC1-206ENST00000455111 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
GPC1-206ENST00000455111 COMMD3Q9UBI1 195 aa11.79□□□□□ -0.52
GPC1-206ENST00000455111 KIR2DL5BA0A0G2JN68 375 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 KIR2DL5BA0A0G2JPC4 375 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 CXorf65A6NEN9 183 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 M0QYG6 137 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 HPGDSO60760 199 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 SNAPC5O75971 98 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 APOC4P55056 127 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 UCP3P55916 312 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 VBP1P61758 197 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
GPC1-206ENST00000455111 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 SNX29P2Q8IUI4 249 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 KIR2DL5AQ8N109 375 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 FAM24BQ8N5W8 94 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 KIR2DL5BQ8NHK3 375 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 FUNDC2Q9BWH2 189 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 NAA50Q9GZZ1 169 aaKnown RBP11.78□□□□□ -0.52
GPC1-206ENST00000455111 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
GPC1-206ENST00000455111 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
GPC1-206ENST00000455111 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 LY6G6CO95867 125 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 PI3P19957 117 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 TFPI2P48307 235 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 RPP25LQ8N5L8 163 aaKnown RBP11.77□□□□□ -0.53
GPC1-206ENST00000455111 TMEM116Q8NCL8 245 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 TMEM56Q96MV1 263 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
GPC1-206ENST00000455111 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms