RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 Q6ZS46 218 aa13.12□□□□□ -0.31
LINC00963-208ENST00000454968 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
LINC00963-208ENST00000454968 DCUN1D4Q92564 292 aa13.12□□□□□ -0.31
LINC00963-208ENST00000454968 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
LINC00963-208ENST00000454968 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-208ENST00000454968 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
LINC00963-208ENST00000454968 SH2D7A6NKC9 451 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-208ENST00000454968 PRSS46E5RG02 174 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 L7N2F9 121 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 AREGP15514 252 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 VAMP2P63027 116 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
LINC00963-208ENST00000454968 ACOT7LQ6ZUV0 252 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 HINT2Q9BX68 163 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
LINC00963-208ENST00000454968 IGSF23A1L1A6 192 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 FAM24AA6NFZ4 105 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 ARPC5O15511 151 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 BRI3O95415 125 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 OR13C7P0DN81 318 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 CXCL2P19875 107 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 RPL12P30050 165 aaKnown RBP13.1□□□□□ -0.31
LINC00963-208ENST00000454968 BAXQ07812 192 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 OR2F1Q13607 317 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 LGALSLQ3ZCW2 172 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-208ENST00000454968 OR1P1Q8NH06 330 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 P2RX4Q99571 388 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
LINC00963-208ENST00000454968 ZNF702PQ9H963 129 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
LINC00963-208ENST00000454968 STRAPQ9Y3F4 350 aaKnown RBP13.1□□□□□ -0.31
LINC00963-208ENST00000454968 H3BP45 60 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
LINC00963-208ENST00000454968 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00963-208ENST00000454968 NPY1RP25929 384 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 SULT1A1P50225 295 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
LINC00963-208ENST00000454968 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
LINC00963-208ENST00000454968 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.311e-6■■■■□ 24.6
LINC00963-208ENST00000454968 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 SLC35E3Q7Z769 313 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 HAPLN4Q86UW8 402 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 KCNRGQ8N5I3 272 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 LFNGQ8NES3 379 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 SLC25A31Q9H0C2 315 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 DMRT1Q9Y5R6 373 aa13.09□□□□□ -0.31
LINC00963-208ENST00000454968 F11RQ9Y624 299 aaKnown RBP13.09□□□□□ -0.31
LINC00963-208ENST00000454968 TRIM77I1YAP6 450 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 AP4M1O00189 453 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 FBXO24O75426 580 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 TSPAN9O75954 239 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
LINC00963-208ENST00000454968 CAV2P51636 162 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 MFAP2P55001 183 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 CFHR3Q02985 330 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 INO80EQ8NBZ0 244 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-208ENST00000454968 FAM110DQ8TAY7 271 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-208ENST00000454968 DUX5Q96PT3 197 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 HSPB11Q9Y547 144 aa13.08□□□□□ -0.32
LINC00963-208ENST00000454968 A0A0D9SG52 128 aa13.07□□□□□ -0.32
LINC00963-208ENST00000454968 FAM181BA6NEQ2 426 aa13.07□□□□□ -0.32
LINC00963-208ENST00000454968 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
LINC00963-208ENST00000454968 ARL16Q0P5N6 197 aa13.07□□□□□ -0.32
LINC00963-208ENST00000454968 TMEM267Q0VDI3 215 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-208ENST00000454968 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
LINC00963-208ENST00000454968 C2CD3Q4AC94 2353 aa13.07□□□□□ -0.32
LINC00963-208ENST00000454968 IFNA10P01566 189 aa13.06□□□□□ -0.32
LINC00963-208ENST00000454968 METTL15P1P0C7V9 234 aa13.06□□□□□ -0.32
LINC00963-208ENST00000454968 SNCAP37840 140 aa13.06□□□□□ -0.32
LINC00963-208ENST00000454968 NKX2-5P52952 324 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-208ENST00000454968 NHLH2Q02577 135 aa13.06□□□□□ -0.32
LINC00963-208ENST00000454968 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
LINC00963-208ENST00000454968 FANCD2OSQ96PS1 177 aa13.06□□□□□ -0.32
LINC00963-208ENST00000454968 IGLV11-55A0A075B6I3 123 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 TRAV41A0A0B4J266 112 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 G3V318 75 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 SOX15O60248 233 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 REG1AP05451 166 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 SUB1P53999 127 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00963-208ENST00000454968 RAB11AP62491 216 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 STX12Q86Y82 276 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 ABHD5Q8WTS1 349 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 BSCL2Q96G97 398 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-208ENST00000454968 WNT10AQ9GZT5 417 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 SERTAD4Q9NUC0 356 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 TRBV9A0A0B4J1U6 114 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 CORTO00230 105 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 TCF21O43680 179 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 CST7O76096 145 aa13.05□□□□□ -0.32
LINC00963-208ENST00000454968 APELAP0DMC3 54 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms