RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CDC42P60953 191 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 HES1Q14469 280 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 IBA57Q5T440 356 aaKnown RBP2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 GOLT1AQ6ZVE7 132 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 TMED4Q7Z7H5 227 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 DYNAPQ8N1N2 210 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 SMIM20Q8N5G0 67 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 OR52R1Q8NGF1 315 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 ACOT12Q8WYK0 555 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 SLC7A6Q92536 515 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 PARVBQ9HBI1 364 aa2.03□□□□□ -2.08
HMGN3P1-201ENST00000453847 ADGRB3O60242 1522 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV4A0A0B4J268 109 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A0J9YW62 118 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RBP1P09455 135 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SMIM17P0DL12 118 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TAS2R41P59536 307 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RAB14P61106 215 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 AP1S1P61966 158 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNG3P63215 75 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 MEF2BQ02080 365 aaPredicted RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPL18Q07020 188 aaKnown RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 POU6F1Q14863 301 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TAF9Q16594 264 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 TMPPEQ6ZT21 453 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 LHFPL1Q86WI0 220 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SLC25A40Q8TBP6 338 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 GINS3Q9BRX5 216 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 PSORS1C2Q9UIG4 136 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 UTP11Q9Y3A2 253 aaKnown RBP2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 CCDC88AQ3V6T2 1871 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 SYNMO15061 1565 aa2.02□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ATG12O94817 140 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 C1QAP02745 245 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 PPBPP02775 128 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 GZMHP20718 246 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 SRIP30626 198 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 FUSP35637 526 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ATP5G3P48201 142 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TPI1P60174 286 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 AKR1C1Q04828 323 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 AGTRAPQ6RW13 159 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF767PQ75MW2 155 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TERB2Q8NHR7 220 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNPDA2Q8TDQ7 276 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 SELENOSQ9BQE4 189 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 VCX3BQ9H321 246 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TUBA4BQ9H853 241 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 MED29Q9NX70 200 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 NAT8Q9UHE5 227 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH3P11055 1940 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 TOPBP1Q92547 1522 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 ECM29Q5VYK3 1845 aa2.01□□□□□ -2.09
HMGN3P1-201ENST00000453847 HEATR5AQ86XA9 2040 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A1B0GVG6 124 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 FABP5P3A8MUU1 101 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 HMGB3O15347 200 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 MFSD11O43934 449 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 CIAO1O76071 339 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 IFNA1P01562 189 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGKV1-16P04430 117 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ERP29P30040 261 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SUPT4H1P63272 117 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ARHGAP11BQ3KRB8 267 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPL22L1Q6P5R6 122 aaKnown RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF705AQ6ZN79 300 aaPredicted RBP2□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q6ZS52 159 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TCF24Q7RTU0 167 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SLC35E3Q7Z769 313 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 EXOC3-AS1Q8N2X6 119 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 FAM172AQ8WUF8 416 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 GPR146Q96CH1 333 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q9BRP9 147 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 CCDC90BQ9GZT6 254 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRABDQ9H4I3 376 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SMPXQ9UHP9 88 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 SDK2Q58EX2 2172 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 KDM5BQ9UGL1 1544 aa2□□□□□ -2.09
HMGN3P1-201ENST00000453847 ROCK1Q13464 1354 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLPSP04118 112 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 UCHL1P09936 223 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PPIBP23284 216 aaKnown RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 HIST1H4AP62805 103 aaKnown RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF791Q3KP31 576 aaPredicted RBP1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 FAM27BQ5VT28 67 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 Q6Q795 121 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 BOLA2Q9H3K6 86 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PRNDQ9UKY0 176 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 PYCARDQ9ULZ3 195 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 UFC1Q9Y3C8 167 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 STRCQ7RTU9 1775 aa1.99□□□□□ -2.09
HMGN3P1-201ENST00000453847 DENND4CQ5VZ89 1909 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH2Q9UKX2 1941 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms