RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RPL23AP62750 156 aaKnown RBP18.71■□□□□ 0.58
CPSF4-207ENST00000451876 TNFRSF9Q07011 255 aa18.71■□□□□ 0.58
CPSF4-207ENST00000451876 C2orf68Q2NKX9 166 aa18.71■□□□□ 0.58
CPSF4-207ENST00000451876 NSUN5P1Q3KNT7 163 aa18.71■□□□□ 0.58
CPSF4-207ENST00000451876 FANCD2OSQ96PS1 177 aa18.71■□□□□ 0.58
CPSF4-207ENST00000451876 HSPB7Q9UBY9 170 aa18.71■□□□□ 0.58
CPSF4-207ENST00000451876 BRI3O95415 125 aa18.7■□□□□ 0.58
CPSF4-207ENST00000451876 HOXA1P49639 335 aaPredicted RBP18.7■□□□□ 0.58
CPSF4-207ENST00000451876 NDUFA11Q86Y39 141 aa18.7■□□□□ 0.58
CPSF4-207ENST00000451876 OR2C3Q8N628 320 aa18.7■□□□□ 0.58
CPSF4-207ENST00000451876 ZNF491Q8N8L2 437 aa18.7■□□□□ 0.58
CPSF4-207ENST00000451876 C7orf66A4D0T2 115 aa18.69■□□□□ 0.58
CPSF4-207ENST00000451876 TRBV9A0A0B4J1U6 114 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 DEFA4P12838 97 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 MFAP2P55001 183 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 GNB4Q9HAV0 340 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 ZFP57Q9NU63 452 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 F11RQ9Y624 299 aaKnown RBP18.68■□□□□ 0.58
CPSF4-207ENST00000451876 ALG5Q9Y673 324 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 TRRAPQ9Y4A5 3859 aa18.68■□□□□ 0.58
CPSF4-207ENST00000451876 IGLV11-55A0A075B6I3 123 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 CEBPZOSA8MTT3 80 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 INS-IGF2F8WCM5 200 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 OR2J3O76001 311 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 CDX1P47902 265 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-207ENST00000451876 RHOGP84095 191 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 IAH1Q2TAA2 248 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-207ENST00000451876 KLHL30-AS1Q8NEE0 82 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 UBE2E2Q96LR5 201 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 P2RX4Q99571 388 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 RBKSQ9H477 322 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 C13orf42A0A1B0GVH6 325 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 FAM25EA8MYX2 175 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 OR4D5Q8NGN0 318 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 OR5B12Q96R08 314 aa18.67■□□□□ 0.58
CPSF4-207ENST00000451876 IGHV3-11P01762 117 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 ERHP84090 104 aaKnown RBP18.66■□□□□ 0.58
CPSF4-207ENST00000451876 KLK9Q2XQG4 91 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 C8orf86Q6ZUL3 223 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 MRPL41Q8IXM3 137 aaKnown RBP18.66■□□□□ 0.58
CPSF4-207ENST00000451876 ZBTB8BQ8NAP8 495 aaPredicted RBP18.66■□□□□ 0.58
CPSF4-207ENST00000451876 ZNF114Q8NC26 417 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 ENY2Q9NPA8 101 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 CACFD1Q9UGQ2 172 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 KLK9Q9UKQ9 250 aa18.66■□□□□ 0.58
CPSF4-207ENST00000451876 FAM90A26D6RGX4 464 aa18.65■□□□□ 0.58
CPSF4-207ENST00000451876 MAGT1Q9H0U3 335 aa18.65■□□□□ 0.58
CPSF4-207ENST00000451876 C5orf51A6NDU8 294 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 NUDT19A8MXV4 375 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 DEFB136Q30KP8 78 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 NECAP1Q8NC96 275 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 OR1P1Q8NH06 330 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 DTD1Q8TEA8 209 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 HEYLQ9NQ87 328 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-207ENST00000451876 GSKIPQ9P0R6 139 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 FBXL7Q9UJT9 491 aa18.64■□□□□ 0.57
CPSF4-207ENST00000451876 FAM223BA6NKX1 122 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 GOSR2O14653 212 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 SSNA1O43805 119 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 NDUFB8O95169 186 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 RNASE2P10153 161 aaKnown RBP18.63■□□□□ 0.57
CPSF4-207ENST00000451876 C15orf32Q32M92 178 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 BSXQ3C1V8 233 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 FAM223AQ8IWN6 122 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 C4orf3Q8WVX3 66 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 S4R3C0 116 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 I3L521 148 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 SIX6O95475 246 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 TSPAN15O95858 294 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 SNCAP37840 140 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 NKX2-1P43699 371 aaPredicted RBP18.63■□□□□ 0.57
CPSF4-207ENST00000451876 ID3Q02535 119 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 SLC25A24Q6NUK1 477 aa18.63■□□□□ 0.57
CPSF4-207ENST00000451876 SCGB1D2O95969 90 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 IAPPP10997 89 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 HIST1H1BP16401 226 aaKnown RBP18.62■□□□□ 0.57
CPSF4-207ENST00000451876 GSG1LQ6UXU4 331 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 USMG5Q96IX5 58 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 DUX3Q96PT4 197 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 WNK1Q9H4A3 2382 aa18.62■□□□□ 0.57
CPSF4-207ENST00000451876 A0A0G2JLM5 398 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 MFSD2BA6NFX1 497 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 SYNGR2O43760 224 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 POLR2GP62487 172 aaKnown RBP eCLIP18.61■□□□□ 0.57
CPSF4-207ENST00000451876 SLC24A4Q8NFF2 622 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 TMEM170AQ8WVE7 144 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 HIPK2Q9H2X6 1198 aa18.61■□□□□ 0.57
CPSF4-207ENST00000451876 LGALS1P09382 135 aaKnown RBP18.6■□□□□ 0.57
CPSF4-207ENST00000451876 C2orf50Q96LR7 162 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 PKD1L1Q8TDX9 2849 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 M0QZ24 198 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 IGHV3-23P01764 117 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 HTR2BP41595 481 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 H2BFSP57053 126 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 ATP5G2Q06055 141 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 EXOSC2Q13868 293 aaKnown RBP18.6■□□□□ 0.57
CPSF4-207ENST00000451876 ETV3LQ6ZN32 361 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 OR1L6Q8NGR2 347 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 MISP3Q96FF7 219 aa18.6■□□□□ 0.57
CPSF4-207ENST00000451876 IGHV3-21A0A0B4J1V1 117 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms