RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 OR4A47Q6IF82 309 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 ETV3LQ6ZN32 361 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 C8orf86Q6ZUL3 223 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 LYZL2Q7Z4W2 148 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 COMMD7Q86VX2 200 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 VKORC1L1Q8N0U8 176 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 PUSL1Q8N0Z8 303 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 ZNF471Q9BX82 626 aaPredicted RBP13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 FBXL15Q9H469 300 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 AURKAIP1Q9NWT8 199 aaPredicted RBP13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 GSKIPQ9P0R6 139 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 ACTL6BO94805 426 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 KBTBD11O94819 623 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 IGKV1-5P01602 117 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 LYL1P12980 280 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 S100A10P60903 97 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 IAH1Q2TAA2 248 aaPredicted RBP13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 GGNBP1Q5YKI7 109 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 PPP1R27Q86WC6 154 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 FAM71E2Q8N5Q1 922 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 KLHL30-AS1Q8NEE0 82 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 TMEM167AQ8TBQ9 72 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 ST8SIA2Q92186 375 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 DUX3Q96PT4 197 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 SLC25A32Q9H2D1 315 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 ZC4H2Q9NQZ6 224 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
PRPF40A-204ENST00000450303 RPS10-NUDT3A0A1W2PQS6 291 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 UPK2O00526 184 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 RBMXL2O75526 392 aaKnown RBP13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 CRYGBP07316 175 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 SLC25A6P12236 298 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 MAS1LP35410 378 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 TEX38Q6PEX7 206 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 MRPL41Q8IXM3 137 aaKnown RBP13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 LINC00482Q8N8I6 264 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 GPR146Q96CH1 333 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 MED9Q9NWA0 146 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
PRPF40A-204ENST00000450303 A0A1B0GU03 582 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 TAAR5O14804 337 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 FGF2P09038 288 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 TPT1P13693 172 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 RPL8P62917 257 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 ALKAL2Q6UX46 152 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 COMMD1Q8N668 190 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 LRRC20Q8TCA0 184 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 CLCC1Q96S66 551 aa13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-204ENST00000450303 CNIH1O95406 144 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 IL6RP08887 468 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 P0C879 139 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 PRSS8Q16651 343 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 NMSQ5H8A3 153 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 OR1S1Q8NH92 325 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 RCC1LQ96I51 464 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 OR10C1Q96KK4 312 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 COMMD5Q9GZQ3 224 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 CACNG5Q9UF02 275 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 WSB1Q9Y6I7 421 aa13.31□□□□□ -0.28
PRPF40A-204ENST00000450303 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 CA2P00918 260 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 OR9G9P0C7N8 305 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 HOXD3P31249 432 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 MYCNOSP40205 109 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 RAB32Q13637 225 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 TNXAQ16473 311 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 CXorf66Q5JRM2 361 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 RNF126Q9BV68 326 aa13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-204ENST00000450303 C15orf61A6NNL5 157 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 GNB1P62873 340 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 CFHR3Q02985 330 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 IL15RAQ13261 267 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 DEFB136Q30KP8 78 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 ZNF562Q6V9R5 426 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 ZNF429Q86V71 674 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 STOML3Q8TAV4 291 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 RAX2Q96IS3 184 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 FOXA2Q9Y261 457 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 ZNF257Q9Y2Q1 563 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 NSG2Q9Y328 171 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 OR51B2Q9Y5P1 312 aa13.29□□□□□ -0.28
PRPF40A-204ENST00000450303 DNAH3Q8TD57 4116 aa13.28□□□□□ -0.28
PRPF40A-204ENST00000450303 TRAV3A0A0B4J244 114 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms