RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LRRC37A5PQ49AS3 106 aa14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 HSD17B13Q7Z5P4 300 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 OR5AU1Q8NGC0 362 aa14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 TMEM158Q8WZ71 300 aa14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 MS4A10Q96PG2 267 aa14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 GON7Q9BXV9 100 aa14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 ZNF436Q9C0F3 470 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-203ENST00000447216 A0A1B0GUS0 222 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 IGHG4P01861 327 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 CRYGCP07315 174 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 PF4V1P10720 104 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 MFAP2P55001 183 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 KRTAP10-3P60369 221 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 CYCSP99999 105 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 SRSF4Q08170 494 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 MRPL41Q8IXM3 137 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 C11orf44Q8N8P7 122 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 P2RX4Q99571 388 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 HIPK2Q9H2X6 1198 aa14.05□□□□□ -0.16
TRAPPC4-203ENST00000447216 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 TMEM50AO95807 157 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 IGLV1-40P01703 118 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 RNASE2P10153 161 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 DEFA4P12838 97 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 PPP1R1CQ8WVI7 109 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 DMRT1Q9Y5R6 373 aa14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 F11RQ9Y624 299 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-203ENST00000447216 H3BP45 60 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 GIPP09681 153 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 CD28P10747 220 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 SNCAP37840 140 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 PAX9P55771 341 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 RIPPLY3P57055 190 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 CD83Q01151 205 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 TCTEX1D4Q5JR98 221 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 SLC25A24Q6NUK1 477 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 TEX38Q6PEX7 206 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 TMEM170AQ8WVE7 144 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 FANCD2OSQ96PS1 177 aa14.03□□□□□ -0.16
TRAPPC4-203ENST00000447216 TENM1Q9UKZ4 2725 aa14.02□□□□□ -0.16
TRAPPC4-203ENST00000447216 H0YIZ8 118 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR2J3O76001 311 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 IFNA10P01566 189 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 TRGV3P03979 118 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 RPLP1P05386 114 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 PSMB8P28062 276 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 BCAP31P51572 246 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 TPPP2P59282 170 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 FOXE3Q13461 319 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 BSXQ3C1V8 233 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 ZNF114Q8NC26 417 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 SLC24A4Q8NFF2 622 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 WFDC12Q8WWY7 111 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 CIB3Q96Q77 187 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR4C12Q96R67 309 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 C11orf1Q9H5F2 150 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 PSENENQ9NZ42 101 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-203ENST00000447216 COL6A5A8TX70 2615 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 C15orf62A8K5M9 175 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 L7N2F9 121 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 NDUFB8O95169 186 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 MPC2O95563 127 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 ELANEP08246 267 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 NPY1RP25929 384 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 HTR2BP41595 481 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 RAB9AP51151 201 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 VAMP2P63027 116 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 RHOGP84095 191 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 Q5BKY6 102 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 SPANXN5Q5MJ07 72 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 TMEM65Q6PI78 240 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 COMMD1Q8N668 190 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 OR1P1Q8NH06 330 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 MISP3Q96FF7 219 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 SMIM8Q96KF7 97 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 RAB40CQ96S21 281 aa14.01□□□□□ -0.17
TRAPPC4-203ENST00000447216 TRAV14DV4A0A0A6YYC5 116 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 TRBV9A0A0B4J1U6 114 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 IGHV3-21A0A0B4J1V1 117 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 H3BUA1 57 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 DEDDO75618 318 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 SUB1P53999 127 aaKnown RBP eCLIP14□□□□□ -0.172e-9■■■■■ 55.6
TRAPPC4-203ENST00000447216 RAP2BP61225 183 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 C2orf83Q53S99 150 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 KHDC1LQ5JSQ8 128 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 RANGRFQ9HD47 186 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-203ENST00000447216 FBXL7Q9UJT9 491 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 S4R3C0 116 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 U3KQ87 197 aa14□□□□□ -0.17
TRAPPC4-203ENST00000447216 SMLR1H3BR10 107 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 RLN2P04090 185 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 KIAA0141Q14154 515 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 RNF152Q8N8N0 203 aa13.99□□□□□ -0.17
TRAPPC4-203ENST00000447216 MDFIQ99750 246 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms