RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 KCTD21Q4G0X4 260 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 LPCAT3Q6P1A2 487 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 STPG3Q8N7X2 389 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 SAMD12Q8N8I0 201 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 UBAC2Q8NBM4 344 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 CHRDL1Q9BU40 450 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 UBQLN2Q9UHD9 624 aa15.41■□□□□ 0.06
CPNE1-219ENST00000440240 IGHV3-21A0A0B4J1V1 117 aa15.4■□□□□ 0.06
CPNE1-219ENST00000440240 A0A0J9YWU9 116 aa15.4■□□□□ 0.06
CPNE1-219ENST00000440240 C15orf62A8K5M9 175 aa15.4■□□□□ 0.06
CPNE1-219ENST00000440240 K7EIM0 57 aa15.4■□□□□ 0.06
CPNE1-219ENST00000440240 RPS19P39019 145 aaKnown RBP15.4■□□□□ 0.06
CPNE1-219ENST00000440240 Q56UQ5 140 aa15.4■□□□□ 0.06
CPNE1-219ENST00000440240 FAM212BQ9NTI7 297 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-219ENST00000440240 NUPR2A6NF83 97 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 F8W735 103 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-219ENST00000440240 ADMP35318 185 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 LYG2Q86SG7 212 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 LYSMD2Q8IV50 215 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 OR1P1Q8NH06 330 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 LINC00476Q8WZB0 136 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 TMEM14BQ9NUH8 114 aa15.39■□□□□ 0.05
CPNE1-219ENST00000440240 ALMS1Q8TCU4 4167 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 CTSGP08311 255 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 ATF4P18848 351 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-219ENST00000440240 CMC4P56277 68 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-219ENST00000440240 RELQ04864 619 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-219ENST00000440240 PMS2P11Q13670 270 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 DEFB135Q30KP9 77 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 ODF3L2Q3SX64 289 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 RNF183Q96D59 192 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 C6orf62Q9GZU0 229 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-219ENST00000440240 SMPXQ9UHP9 88 aa15.38■□□□□ 0.05
CPNE1-219ENST00000440240 NUPL2O15504 423 aaKnown RBP15.37■□□□□ 0.05
CPNE1-219ENST00000440240 HRH1P35367 487 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 TGFBR1P36897 503 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 TSPAN5P62079 268 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 TMEM217Q8N7C4 229 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 GALNT14Q96FL9 552 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 TXN2Q99757 166 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 FXYD6Q9H0Q3 95 aa15.37■□□□□ 0.05
CPNE1-219ENST00000440240 IGHV3OR16-8A0A075B7F1 116 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 C15orf61A6NNL5 157 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 ZNF207O43670 478 aaKnown RBP15.36■□□□□ 0.05
CPNE1-219ENST00000440240 LY6G6CO95867 125 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 CTSDP07339 412 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-219ENST00000440240 HLA-DMAP28067 261 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 MFAP4P55083 255 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 PHLDA2Q53GA4 152 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 CEMP1Q6PRD7 247 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-219ENST00000440240 MAP6D1Q9H9H5 199 aa15.36■□□□□ 0.05
CPNE1-219ENST00000440240 SMIM31A0A1B0GVY4 71 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 DBX1A6NMT0 343 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 FCGR2BP31994 310 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-219ENST00000440240 H2BFWTQ7Z2G1 175 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 OR4A16Q8NH70 328 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 GPX8Q8TED1 209 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 SLC25A46Q96AG3 418 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 RHPN1-AS1Q9BWJ2 59 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 VCX3AQ9NNX9 186 aa15.35■□□□□ 0.05
CPNE1-219ENST00000440240 KLK5Q9Y337 293 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-219ENST00000440240 IGHV7-4-1A0A0J9YVY3 117 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 YIF1AO95070 293 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 RPL35AP18077 110 aaKnown RBP15.34■□□□□ 0.05
CPNE1-219ENST00000440240 LSM3P62310 102 aaKnown RBP15.34■□□□□ 0.05
CPNE1-219ENST00000440240 EWSR1Q01844 656 aaKnown RBP eCLIP15.34■□□□□ 0.05
CPNE1-219ENST00000440240 TBC1D26Q86UD7 250 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 TMEM116Q8NCL8 245 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 YIPF6Q96EC8 236 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 MISP3Q96FF7 219 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 SEC22AQ96IW7 307 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 OR10C1Q96KK4 312 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 CMTM3Q96MX0 182 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 RNF2Q99496 336 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 SCPEP1Q9HB40 452 aa15.34■□□□□ 0.05
CPNE1-219ENST00000440240 TRAV14DV4A0A0A6YYC5 116 aa15.33■□□□□ 0.04
CPNE1-219ENST00000440240 I3L2K1 104 aa15.33■□□□□ 0.04
CPNE1-219ENST00000440240 CHEK1O14757 476 aa15.33■□□□□ 0.04
CPNE1-219ENST00000440240 NXF2Q9GZY0 626 aaKnown RBP15.33■□□□□ 0.04
CPNE1-219ENST00000440240 APOA1P02647 267 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 CD5P06127 495 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 UCP3P55916 312 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 HSPE1P61604 102 aaKnown RBP15.32■□□□□ 0.04
CPNE1-219ENST00000440240 ERHP84090 104 aaKnown RBP15.32■□□□□ 0.04
CPNE1-219ENST00000440240 ZNF114Q8NC26 417 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 CSTL1Q9H114 145 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 COMMD3Q9UBI1 195 aa15.32■□□□□ 0.04
CPNE1-219ENST00000440240 A0A087WXM4 84 aa15.31■□□□□ 0.04
CPNE1-219ENST00000440240 MT-CO2P00403 227 aa15.31■□□□□ 0.04
CPNE1-219ENST00000440240 EIF4EP06730 217 aaKnown RBP15.31■□□□□ 0.04
CPNE1-219ENST00000440240 PAFAH1B2P68402 229 aa15.31■□□□□ 0.04
CPNE1-219ENST00000440240 PRCDQ00LT1 54 aa15.31■□□□□ 0.04
CPNE1-219ENST00000440240 APRG1Q8IVJ8 170 aa15.31■□□□□ 0.04
CPNE1-219ENST00000440240 MPTX1A8MV57 137 aa15.3■□□□□ 0.04
CPNE1-219ENST00000440240 GNG7O60262 68 aa15.3■□□□□ 0.04
CPNE1-219ENST00000440240 RCVRNP35243 200 aa15.3■□□□□ 0.04
CPNE1-219ENST00000440240 ZNF414Q96IQ9 312 aa15.3■□□□□ 0.04
CPNE1-219ENST00000440240 GINS3Q9BRX5 216 aa15.3■□□□□ 0.04
CPNE1-219ENST00000440240 IGKV1-39P01597 117 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 IGKV1D-39P04432 117 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms