RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 AKIRIN2Q53H80 203 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SOHLH1Q5JUK2 328 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SPANXN5Q5MJ07 72 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZC2HC1BQ5TFG8 222 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM53AQ6NSI3 398 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 BTNL3Q6UXE8 466 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM14EPQ6UXP3 125 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSX8Q7RTT4 187 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 H2BFWTQ7Z2G1 175 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 DOLPP1Q86YN1 238 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CBLN2Q8IUK8 224 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPRMLQ8N4K4 120 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF561Q8N587 486 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF525Q8N782 197 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TPRX1Q8N7U7 411 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 C15orf54Q8N8G6 183 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 NUP37Q8NFH4 326 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CD300LFQ8TDQ1 290 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM222BQ8WU58 562 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ITLN1Q8WWA0 313 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 MBD3L1Q8WWY6 194 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 PINX1Q96BK5 328 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CIB3Q96Q77 187 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 YPEL2Q96QA6 119 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR2V2Q96R30 315 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR4C12Q96R67 309 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 HSD17B10Q99714 261 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSX3Q99909 188 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 RARRES2Q99969 163 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 AGMATQ9BSE5 352 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 DCTN5Q9BTE1 182 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 MRPL37Q9BZE1 423 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 WDR61Q9GZS3 305 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 GFRA4Q9GZZ7 299 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TUBA4BQ9H853 241 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 GNG12Q9UBI6 72 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 MLXQ9UH92 298 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 JPT1Q9UK76 154 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 PSG11Q9UQ72 335 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 FBXO7Q9Y3I1 522 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TIMM9Q9Y5J7 89 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 RFNGQ9Y644 331 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 MED12Q93074 2177 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 NOTCH3Q9UM47 2321 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 SPTBN5Q9NRC6 3674 aaKnown RBP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 C7orf77A4D0Y5 90 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CEBPZOSA8MTT3 80 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 C17orf112F2Z3M2 114 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 M0R1X1 148 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ATP6V0E1O15342 81 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RBFOX2O43251 390 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 IFNA1P01562 189 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV1-46P01743 117 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 MBP02144 154 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CRYBA1P05813 215 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 P0C879 139 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR13C7P0DN81 318 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 FOLR2P14207 255 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CTRB1P17538 263 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB7AP51149 207 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TDGF1P3P51864 188 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 EDDM3BP56851 147 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB5BP61020 215 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 GNB2P62879 340 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RHEBQ15382 184 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 HAGHQ16775 308 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 LTC4SQ16873 150 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 C17orf58Q2M2W7 97 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 Q3ZCU0 254 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RNF212Q495C1 297 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 C14orf177Q52M58 125 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 PDLIM3Q53GG5 364 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 KHDC3LQ587J8 217 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM41BQ5BJD5 291 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR2B11Q5JQS5 317 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF506Q5JVG8 444 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 AVPI1Q5T686 147 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 NCR3LG1Q68D85 454 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CTRB2Q6GPI1 263 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR8G2PQ6IF36 304 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF429Q86V71 674 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF383Q8NA42 475 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNRF1Q8ND25 227 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR10P1Q8NGE3 313 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR10G4Q8NGN3 311 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR52E5Q8NH55 327 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CLDND2Q8NHS1 167 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RXFP4Q8TDU9 374 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 DTD1Q8TEA8 209 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TAF15Q92804 592 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB39BQ96DA2 213 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 SDSLQ96GA7 329 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CLCC1Q96S66 551 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 S1PR3Q99500 378 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CCL13Q99616 98 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RSG1Q9BU20 258 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms