RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SAA4P35542 130 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 AKR1C3P42330 323 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-205ENST00000439958 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 IL34Q6ZMJ4 242 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 DYNAPQ8N1N2 210 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 OR2T6Q8NHC8 308 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 RCC1LQ96I51 464 aaKnown RBP12.11□□□□□ -0.47
CPSF7-205ENST00000439958 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 DOK5Q9P104 306 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM218A2RU14 115 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 VENTXO95231 258 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-205ENST00000439958 WT1-ASQ06250 92 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 PBDC1Q9BVG4 233 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 TNFRSF19Q9NS68 423 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 PMS2P5A8MQ11 134 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 C9JQL5 133 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 M0R036 132 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 RAB31Q13636 194 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-205ENST00000439958 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 MTORP42345 2549 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 UBE2G2P60604 165 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 PRSS8Q16651 343 aa12.1□□□□□ -0.47
CPSF7-205ENST00000439958 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-205ENST00000439958 POU2AF1Q16633 256 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 PUSL1Q8N0Z8 303 aaKnown RBP12.09□□□□□ -0.47
CPSF7-205ENST00000439958 C8orf31Q8N9H6 132 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 NPVFQ9HCQ7 196 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 MED9Q9NWA0 146 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 KPTNQ9Y664 436 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM11P17152 192 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 FAM71F2Q6NXP2 309 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM88Q6PEY1 159 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 TEPPQ6URK8 271 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM219Q86XT9 240 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 RPP25LQ8N5L8 163 aaKnown RBP12.09□□□□□ -0.47
CPSF7-205ENST00000439958 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-205ENST00000439958 SLC35E1Q96K37 410 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 ZNF257Q9Y2Q1 563 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
CPSF7-205ENST00000439958 RBP4P02753 201 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 ZNF137PP52743 207 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 B2MP61769 119 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 PEA15Q15121 130 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 FBLN7Q53RD9 439 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.47
CPSF7-205ENST00000439958 KLF17Q5JT82 389 aaPredicted RBP12.08□□□□□ -0.47
CPSF7-205ENST00000439958 PUS1Q9Y606 427 aaKnown RBP eCLIP12.08□□□□□ -0.47
CPSF7-205ENST00000439958 A0A1W2PN81 502 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 FSTL3O95633 263 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 MOSP00540 346 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 CHRNA7P36544 502 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 OR11H6Q8NGC7 330 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 SRSF12Q8WXF0 261 aaKnown RBP12.08□□□□□ -0.48
CPSF7-205ENST00000439958 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 APCP25054 2843 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 TSPAN4O14817 238 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 IL6RP08887 468 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-205ENST00000439958 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.48
CPSF7-205ENST00000439958 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
CPSF7-205ENST00000439958 OR10J1P30954 320 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 SERF2P84101 59 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 FAM120AOSQ5T036 256 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 HIF1ANQ9NWT6 349 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 NBR2O15453 112 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
CPSF7-205ENST00000439958 FXYD3Q14802 87 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 LY6EQ16553 131 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 ZNF674Q2M3X9 581 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 RAB24Q969Q5 203 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 MGST2Q99735 147 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-205ENST00000439958 GCN1Q92616 2671 aaKnown RBP12.07□□□□□ -0.48
CPSF7-205ENST00000439958 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-205ENST00000439958 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 P2RX4Q99571 388 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
CPSF7-205ENST00000439958 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms