RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SIRT7Q9NRC8 400 aa9.47□□□□□ -0.89
SMAD3-202ENST00000439724 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
SMAD3-202ENST00000439724 PUS1Q9Y606 427 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMAD3-202ENST00000439724 A0A1W2PPV4 95 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 H3BQ15 152 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 HMGB3O15347 200 aaKnown RBP9.46□□□□□ -0.89
SMAD3-202ENST00000439724 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMAD3-202ENST00000439724 CEACAM3P40198 252 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 PSMB3P49720 205 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMAD3-202ENST00000439724 B2MP61769 119 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 MEF2BQ02080 365 aaPredicted RBP9.46□□□□□ -0.89
SMAD3-202ENST00000439724 HABP2Q14520 560 aaPredicted RBP9.46□□□□□ -0.89
SMAD3-202ENST00000439724 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 LDLRAD2Q5SZI1 272 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SLC16A13Q7RTY0 426 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SLC35E3Q7Z769 313 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 STPG3Q8N7X2 389 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SSMEM1Q8WWF3 244 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 IGFBPL1Q8WX77 278 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 TUBA4BQ9H853 241 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SLC45A2Q9UMX9 530 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 SIGLEC9Q9Y336 463 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 ZZEF1O43149 2961 aa9.46□□□□□ -0.89
SMAD3-202ENST00000439724 LOC105371267A0A1B0GV96 52 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 DEFA4P12838 97 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 ATF4P18848 351 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-202ENST00000439724 CNTFRP26992 372 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.9
SMAD3-202ENST00000439724 CEBPGP53567 150 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 GAMTQ14353 236 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 AKIRIN2Q53H80 203 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 ZNF114Q8NC26 417 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 TVP23CQ96ET8 276 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 NIPSNAP3BQ9BS92 247 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.9
SMAD3-202ENST00000439724 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 TIMM23O14925 209 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 VENTXO95231 258 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 LINC00869P0C866 280 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
SMAD3-202ENST00000439724 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-202ENST00000439724 CD81P60033 236 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 PAX2Q02962 417 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 KLRD1Q13241 179 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 PPP1R27Q86WC6 154 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 C17orf50Q8WW18 174 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 CFHR4Q92496 578 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 SLC35E1Q96K37 410 aa9.45□□□□□ -0.9
SMAD3-202ENST00000439724 METTL1Q9UBP6 276 aaKnown RBP9.45□□□□□ -0.9
SMAD3-202ENST00000439724 IGKV1OR2-108A0A075B7D4 117 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 A0A087WWC5 75 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 OOSP1A8MZH6 123 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 ACTL6BO94805 426 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 CXorf1O96002 111 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 AKR1C3P42330 323 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 RHOBP62745 196 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
SMAD3-202ENST00000439724 TNXAQ16473 311 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 MINOS1Q5TGZ0 78 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 SIRPDQ9H106 197 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 MINOS1-NBL1R4GNA1 71 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 ARHGAP32A7KAX9 2087 aa9.44□□□□□ -0.9
SMAD3-202ENST00000439724 ITPR1Q14643 2758 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 IGHV2-70DA0A0C4DH43 119 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 COLCA2A8K830 154 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-202ENST00000439724 OR10J1P30954 320 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 LMO4P61968 165 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 VMO1Q7Z5L0 202 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 SRSF8Q9BRL6 282 aaKnown RBP9.43□□□□□ -0.9
SMAD3-202ENST00000439724 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 FBXL15Q9H469 300 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 FNDC4Q9H6D8 234 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-202ENST00000439724 NBEAQ8NFP9 2946 aa9.43□□□□□ -0.9
SMAD3-202ENST00000439724 B4DEV8 164 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 PAGE4O60829 102 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 IGHV4-39P01824 125 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 PDLIM4P50479 330 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 MLANAQ16655 118 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 CCDC144NLQ6NUI1 221 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 LHFPL4Q7Z7J7 247 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 THAP8Q8NA92 274 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 NPBQ8NG41 125 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 NANPQ8TBE9 248 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 GATAD1Q8WUU5 269 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 C19orf24Q9BVV8 132 aa9.42□□□□□ -0.9
SMAD3-202ENST00000439724 KLF2Q9Y5W3 355 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-202ENST00000439724 ZNF727A8MUV8 499 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms