RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 IZUMO4Q1ZYL8 232 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 C1QL4Q86Z23 238 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 LGI3Q8N145 548 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 DCUN1D4Q92564 292 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 EEF1AKMT3Q96AZ1 226 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 CXorf58Q96LI9 332 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 WDR12Q9GZL7 423 aaKnown RBP9.1□□□□□ -0.95
HSPG2-206ENST00000439717 PLEKHA3Q9HB20 300 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-206ENST00000439717 CACFD1Q9UGQ2 172 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 F11RQ9Y624 299 aaKnown RBP9.1□□□□□ -0.95
HSPG2-206ENST00000439717 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 DUXBA0A1W2PPF3 345 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 OVOL1O14753 267 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 PLA2G10O15496 165 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 WIPF1O43516 503 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 IFNA17P01571 189 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-206ENST00000439717 BTCP35070 178 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 SLURP1P55000 103 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.95
HSPG2-206ENST00000439717 DEFA6Q01524 100 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 ZNF846Q147U1 533 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 C9orf66Q5T8R8 295 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 Q6ZRM9 215 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 OR2C3Q8N628 320 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 SLC35G3Q8N808 338 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 OR1P1Q8NH06 330 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 OR52E5Q8NH55 327 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-206ENST00000439717 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 ZMAT5Q9UDW3 170 aaKnown RBP9.09□□□□□ -0.95
HSPG2-206ENST00000439717 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
HSPG2-206ENST00000439717 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 SEC14L6B5MCN3 397 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 LYRM1O43325 122 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 SFT2D2O95562 160 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 VAMP1P23763 118 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 INSL3P51460 131 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 SPCS3P61009 180 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 PPP1R1AQ13522 171 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 KLF5Q13887 457 aaPredicted RBP9.08□□□□□ -0.96
HSPG2-206ENST00000439717 TATDN3Q17R31 274 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 PDLIM3Q53GG5 364 aaPredicted RBP9.08□□□□□ -0.96
HSPG2-206ENST00000439717 SLC25A24Q6NUK1 477 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 LRTM2Q8N967 370 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 VN1R17PQ8TDU5 208 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 PRR13Q9NZ81 148 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 CACNG5Q9UF02 275 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
HSPG2-206ENST00000439717 DNAH3Q8TD57 4116 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 SULT1A3P0DMM9 295 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 SULT1A4P0DMN0 295 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 EGFEM1PQ0D2K5 195 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 RPEL1Q2QD12 228 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 NMSQ5H8A3 153 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 REC114Q7Z4M0 266 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 LYZL2Q7Z4W2 148 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 ATP6V0BQ99437 205 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 ELOVL1Q9BW60 279 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 ENY2Q9NPA8 101 aa9.07□□□□□ -0.96
HSPG2-206ENST00000439717 A0A1B0GU03 582 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 MFSD2BA6NFX1 497 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 BMPR1BO00238 502 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
HSPG2-206ENST00000439717 SNCAP37840 140 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 HOXA1P49639 335 aaPredicted RBP9.06□□□□□ -0.96
HSPG2-206ENST00000439717 SUB1P53999 127 aaKnown RBP eCLIP9.06□□□□□ -0.961e-7■□□□□ 9.4
HSPG2-206ENST00000439717 MFAP2P55001 183 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 SMCO1Q147U7 214 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 ANKRD55Q3KP44 614 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 ACSM6Q6P461 480 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 FLVCR2Q9UPI3 526 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 TMED3Q9Y3Q3 217 aa9.06□□□□□ -0.96
HSPG2-206ENST00000439717 C9orf170A2RU37 121 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 UPK1BO75841 260 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 IGHV3-23P01764 117 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
HSPG2-206ENST00000439717 CLEC3BP05452 202 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 OR4E1P0C645 316 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 SLC25A6P12236 298 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 ARL3P36405 182 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 ASAH1Q13510 395 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 SPINK9Q5DT21 86 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 MZT2BQ6NZ67 158 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 ZNF502Q8TBZ5 544 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 C20orf85Q9H1P6 137 aa9.05□□□□□ -0.96
HSPG2-206ENST00000439717 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 PPP5D1E7EU14 171 aa9.04□□□□□ -0.96
HSPG2-206ENST00000439717 K7EIM0 57 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms