RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C15orf61A6NNL5 157 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 FAM25AB3EWG3 89 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 FAM25CB3EWG5 89 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 FAM25GB3EWG6 89 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 NDUFA4O00483 81 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 HPGDSO60760 199 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 RORCP51449 518 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 MZT2AQ6P582 158 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 H2BFWTQ7Z2G1 175 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 OR2C3Q8N628 320 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 SCARB1Q8WTV0 552 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 SPAG8Q99932 426 aaPredicted RBP13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 TMEM14BQ9NUH8 114 aa13.81□□□□□ -0.2
AC004540.1-201ENST00000439120 ELK1P19419 428 aa13.8□□□□□ -0.2
AC004540.1-201ENST00000439120 MFAP2P55001 183 aa13.8□□□□□ -0.2
AC004540.1-201ENST00000439120 CSMD3Q7Z407 3707 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 JTBO76095 146 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 UCP3P55916 312 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 OR1P1Q8NH06 330 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 AP3S1Q92572 193 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 MISP3Q96FF7 219 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 CHRDL1Q9BU40 450 aa13.79□□□□□ -0.2
AC004540.1-201ENST00000439120 DYNC2H1Q8NCM8 4307 aaKnown RBP13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 K7EIM0 57 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 M0QYG6 137 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 TSPAN4O14817 238 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 PGAM2P15259 253 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 RNASE12Q5GAN4 147 aaKnown RBP13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 MRGPRFQ96AM1 343 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 SEC22AQ96IW7 307 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 UBQLN2Q9UHD9 624 aa13.78□□□□□ -0.2
AC004540.1-201ENST00000439120 ZNF207O43670 478 aaKnown RBP13.77□□□□□ -0.21
AC004540.1-201ENST00000439120 APOC4P55056 127 aa13.77□□□□□ -0.21
AC004540.1-201ENST00000439120 RNASE10Q5GAN6 216 aaKnown RBP13.77□□□□□ -0.21
AC004540.1-201ENST00000439120 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 K7EMT4 169 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 YIF1AO95070 293 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 ADMP35318 185 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 MFAP4P55083 255 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 ERHP84090 104 aaKnown RBP13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 STARD9Q9P2P6 4700 aa13.76□□□□□ -0.21
AC004540.1-201ENST00000439120 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 IGKV1-39P01597 117 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 IGKV1D-39P04432 117 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 HSPE1P61604 102 aaKnown RBP13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 ZNF486Q96H40 463 aaPredicted RBP13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 LYSTQ99698 3801 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 EXTL2Q9UBQ6 330 aa13.75□□□□□ -0.21
AC004540.1-201ENST00000439120 ATG12O94817 140 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 MT-CO2P00403 227 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 CTSGP08311 255 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 TBPP20226 339 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 AKR1C2P52895 323 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 PIGPP57054 158 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 ARRDC1Q8N5I2 433 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 ZNF114Q8NC26 417 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 C15orf40Q8WUR7 153 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 TXN2Q99757 166 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 PDCD10Q9BUL8 212 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 KLK11Q9UBX7 282 aa13.74□□□□□ -0.21
AC004540.1-201ENST00000439120 I3L2K1 104 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 GNG7O60262 68 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 CD3DP04234 171 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 CTSDP07339 412 aaPredicted RBP13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 ZNF182P17025 639 aaPredicted RBP13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 PI3P19957 117 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 SNCAP37840 140 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 RND3P61587 244 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 SLC35G3Q8N808 338 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 TMEM116Q8NCL8 245 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 OR52I2Q8NH67 350 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 RYR2Q92736 4967 aa13.73□□□□□ -0.21
AC004540.1-201ENST00000439120 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 GABARAPO95166 117 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 IFNA17P01571 189 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 IGHV3-48P01763 117 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 FCGR2BP31994 310 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 PPP5CP53041 499 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 TRIM16LQ309B1 348 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 ODF3L2Q3SX64 289 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 SPINK9Q5DT21 86 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 STPG3Q8N7X2 389 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 CCDC71LQ8N9Z2 235 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 C6orf62Q9GZU0 229 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 NAA50Q9GZZ1 169 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 COPZ2Q9P299 210 aa13.72□□□□□ -0.21
AC004540.1-201ENST00000439120 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
AC004540.1-201ENST00000439120 C3orf85A0A1B0GTC6 90 aa13.71□□□□□ -0.21
AC004540.1-201ENST00000439120 UBE2CO00762 179 aa13.71□□□□□ -0.21
AC004540.1-201ENST00000439120 SPRY2O43597 315 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms