RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 CTRB1P17538 263 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 SNCAP37840 140 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 RRAS2P62070 204 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 CYCSP99999 105 aaKnown RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 CTRB2Q6GPI1 263 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 TMEM65Q6PI78 240 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 C12orf54Q6X4T0 127 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 ZNF114Q8NC26 417 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 OR5T1Q8NG75 326 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 WIPF2Q8TF74 440 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 CIB3Q96Q77 187 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 RBKSQ9H477 322 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 HEYLQ9NQ87 328 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 ZNF355PQ9NSJ1 428 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 ZFP57Q9NU63 452 aa8.27□□□□□ -1.09
HLA-DMB-259ENST00000438510 BOLA2-SMG1P6H3BVE0 249 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 SYNGR2O43760 224 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 SOX15O60248 233 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 PSMB8P28062 276 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 HTR2BP41595 481 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 ID3Q02535 119 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 NDUFA5Q16718 116 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 NOXA1Q86UR1 476 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 OR2C3Q8N628 320 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 RNF152Q8N8N0 203 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 ASB13Q8WXK3 278 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 NMES1Q9C002 83 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 THYN1Q9P016 225 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 F11RQ9Y624 299 aaKnown RBP8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 ATRQ13535 2644 aa8.26□□□□□ -1.09
HLA-DMB-259ENST00000438510 FAM223BA6NKX1 122 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 CORTO00230 105 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 SSSCA1O60232 199 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 TRGV3P03979 118 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 TPPP2P59282 170 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 RPP30P78346 268 aaKnown RBP8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 FCN2Q15485 313 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 KHDC1LQ5JSQ8 128 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 FAM223AQ8IWN6 122 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 SLC24A4Q8NFF2 622 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 OR1P1Q8NH06 330 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 RAB40CQ96S21 281 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 MDFIQ99750 246 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 MAGT1Q9H0U3 335 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 U3KQ87 197 aa8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 FBN1P35555 2871 aaKnown RBP8.25□□□□□ -1.09
HLA-DMB-259ENST00000438510 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 TCRBV4S1A1TA0A5B7 111 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 SIX6O95475 246 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 MBPP02686 304 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 PET100P0DJ07 73 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 CD28P10747 220 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 IAPPP10997 89 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 PVALBP20472 110 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 NPY1RP25929 384 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 RAB9AP51151 201 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 H2BFSP57053 126 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 S100A10P60903 97 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 POLR2GP62487 172 aaKnown RBP eCLIP8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 ZFP69Q49AA0 526 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 NECAP1Q8NC96 275 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 OR11H7Q8NGC8 314 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 USMG5Q96IX5 58 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 MS4A10Q96PG2 267 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 P2RX4Q99571 388 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 ZNF747Q9BV97 191 aa8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 LSM5Q9Y4Y9 91 aaKnown RBP8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 TSSC4Q9Y5U2 329 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-259ENST00000438510 TRBV9A0A0B4J1U6 114 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 K7EPK0 472 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 L7N2F9 121 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RGS13O14921 159 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 OR2J3O76001 311 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 IFNA10P01566 189 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 PRH1P02810 166 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RLN2P04090 185 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 CXCL3P19876 107 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RAB11AP62491 216 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RPL23AP62750 156 aaKnown RBP8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 VAMP2P63027 116 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RHOGP84095 191 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 CD83Q01151 205 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 SRSF4Q08170 494 aaKnown RBP8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 IL15RAQ13261 267 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 RAB32Q13637 225 aa8.23□□□□□ -1.09
HLA-DMB-259ENST00000438510 KLK9Q2XQG4 91 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms