RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 IZUMO4Q1ZYL8 232 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 TMEM268Q5VZI3 342 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 TMED4Q7Z7H5 227 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 TMEM230Q96A57 120 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 EEF1AKMT3Q96AZ1 226 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 CXorf58Q96LI9 332 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
CTSD-205ENST00000438213 MEGF8Q7Z7M0 2845 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 IL7P13232 177 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
CTSD-205ENST00000438213 TMEM187Q14656 261 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 CACFD1Q9UGQ2 172 aa12.59□□□□□ -0.39
CTSD-205ENST00000438213 F11RQ9Y624 299 aaKnown RBP12.59□□□□□ -0.39
CTSD-205ENST00000438213 WIPF1O43516 503 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 EGFEM1PQ0D2K5 195 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 LGI3Q8N145 548 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 LHFPL5Q8TAF8 219 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 OR4C12Q96R67 309 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 ENY2Q9NPA8 101 aa12.58□□□□□ -0.4
CTSD-205ENST00000438213 ST8SIA3O43173 380 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 TRBV12-3P01733 135 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 CCR6P51684 374 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 SUPT4H1P63272 117 aaKnown RBP12.57□□□□□ -0.4
CTSD-205ENST00000438213 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 CENPSQ8N2Z9 138 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 GPR146Q96CH1 333 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 CCDC32Q9BV29 185 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
CTSD-205ENST00000438213 A0A0B4J2A0 478 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 A0A0G2JRQ6 117 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
CTSD-205ENST00000438213 SAP30O75446 220 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 NDUFB6O95139 128 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 PRB2P02812 416 aaPredicted RBP12.56□□□□□ -0.4
CTSD-205ENST00000438213 VAMP1P23763 118 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 SNCAP37840 140 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 SUB1P53999 127 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTSD-205ENST00000438213 SPCS3P61009 180 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
CTSD-205ENST00000438213 PDLIM3Q53GG5 364 aaPredicted RBP12.56□□□□□ -0.4
CTSD-205ENST00000438213 CLEC19AQ6UXS0 136 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 Q6ZRM9 215 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 OR52E5Q8NH55 327 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 SHPKQ9UHJ6 478 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
CTSD-205ENST00000438213 INS-IGF2F8WCM5 200 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 BMPR1BO00238 502 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 CLEC3BP05452 202 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 SULT1A3P0DMM9 295 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 SULT1A4P0DMN0 295 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 ARL3P36405 182 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 SYNJ2BPP57105 145 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 KRTAP10-11P60412 298 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 OR9G4Q8NGQ1 327 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 CACNG5Q9UF02 275 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 S4R3C0 116 aa12.55□□□□□ -0.4
CTSD-205ENST00000438213 DUXBA0A1W2PPF3 345 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 MFSD2BA6NFX1 497 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 SFT2D2O95562 160 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 FAM106AQ4KMX7 169 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 AARDQ4LEZ3 155 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 ATP6V0BQ99437 205 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 AURKAIP1Q9NWT8 199 aaPredicted RBP12.54□□□□□ -0.4
CTSD-205ENST00000438213 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
CTSD-205ENST00000438213 PPP5D1E7EU14 171 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 PLA2G10O15496 165 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 LYRM1O43325 122 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 OR2C1O95371 312 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
CTSD-205ENST00000438213 MFAP2P55001 183 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 GPHB5Q86YW7 130 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 LRTM2Q8N967 370 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 MISP3Q96FF7 219 aa12.53□□□□□ -0.4
CTSD-205ENST00000438213 WDR12Q9GZL7 423 aaKnown RBP12.53□□□□□ -0.4
CTSD-205ENST00000438213 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
CTSD-205ENST00000438213 A0A1B0GU03 582 aa12.52□□□□□ -0.41
CTSD-205ENST00000438213 PPP1R1AQ13522 171 aa12.52□□□□□ -0.41
CTSD-205ENST00000438213 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
CTSD-205ENST00000438213 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
CTSD-205ENST00000438213 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms