RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ANAPC16Q96DE5 110 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 ZNF98A6NK75 572 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 IGHV2-70P01814 119 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 COL8A2P25067 703 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 GPX4P36969 197 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-203ENST00000435201 ATP5G3P48201 142 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 CD69Q07108 199 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 OR10W1Q8NGF6 305 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 CACNG8Q8WXS5 425 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 TMEM204Q9BSN7 226 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 DOK5Q9P104 306 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 SMG1Q96Q15 3661 aaKnown RBP13.54□□□□□ -0.24
LIMK1-203ENST00000435201 H7BYZ3 331 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 CLN5O75503 358 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 RBP4P02753 201 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 LINC00869P0C866 280 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 GCHFRP30047 84 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 LGALS7P47929 136 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 PRRX1P54821 245 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 GAMTQ14353 236 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 HLA-DRB5Q30154 266 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 SSX3Q99909 188 aa13.54□□□□□ -0.24
LIMK1-203ENST00000435201 SEPSECSQ9HD40 501 aaKnown RBP13.54□□□□□ -0.24
LIMK1-203ENST00000435201 TNCP24821 2201 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 NPPCP23582 126 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 GNB1P62873 340 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 C12orf57Q99622 126 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 C19orf24Q9BVV8 132 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 IGHV2-26A0A0B4J1V2 119 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 S100PP25815 95 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 MEOX2P50222 304 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 SUB1P53999 127 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIMK1-203ENST00000435201 PNKDQ8N490 385 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
LIMK1-203ENST00000435201 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 ARL2-SNX15V9GYD0 113 aa13.53□□□□□ -0.24
LIMK1-203ENST00000435201 SPATA31B1PQ5VZV4 182 aa13.52□□□□□ -0.25
LIMK1-203ENST00000435201 SLC16A13Q7RTY0 426 aa13.52□□□□□ -0.25
LIMK1-203ENST00000435201 OR51G1Q8NGK1 321 aa13.52□□□□□ -0.25
LIMK1-203ENST00000435201 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
LIMK1-203ENST00000435201 RAB1BQ9H0U4 201 aa13.52□□□□□ -0.25
LIMK1-203ENST00000435201 ADGRG4Q8IZF6 3080 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 NDUFB4O95168 129 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 PFN1P07737 140 aaKnown RBP13.51□□□□□ -0.25
LIMK1-203ENST00000435201 OR10J1P30954 320 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 FAM78BQ5VT40 261 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 MRPL41Q8IXM3 137 aaKnown RBP13.51□□□□□ -0.25
LIMK1-203ENST00000435201 BEND2Q8NDZ0 799 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 OR8B3Q8NGG8 313 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 FAM122AQ96E09 287 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 OR8B2Q96RD0 313 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 CLEC7AQ9BXN2 247 aa13.51□□□□□ -0.25
LIMK1-203ENST00000435201 IGKV1OR2-108A0A075B7D4 117 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 SLC25A17O43808 307 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 CD99P14209 185 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 GALR1P47211 349 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 PYGO2Q9BRQ0 406 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 TMEM167BQ9NRX6 74 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 MIOXQ9UGB7 285 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 ANKHD1Q8IWZ3 2542 aaKnown RBP13.5□□□□□ -0.25
LIMK1-203ENST00000435201 IGF2RP11717 2491 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 CGB1A6NKQ9 187 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 E7EUB6 86 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 ENSAO43768 121 aaKnown RBP13.5□□□□□ -0.25
LIMK1-203ENST00000435201 TRGC2P03986 189 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 SMIM6P0DI80 62 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 PPIAL4GP0DN37 164 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 WT1-ASQ06250 92 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 CDSNQ15517 529 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 LINC01551Q86U37 167 aa13.5□□□□□ -0.25
LIMK1-203ENST00000435201 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
LIMK1-203ENST00000435201 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-203ENST00000435201 YTHDF2Q9Y5A9 579 aaKnown RBP13.5□□□□□ -0.25
LIMK1-203ENST00000435201 S100A9P06702 114 aaKnown RBP13.49□□□□□ -0.25
LIMK1-203ENST00000435201 OR5G3P0C626 314 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 SRP14P37108 136 aaKnown RBP13.49□□□□□ -0.25
LIMK1-203ENST00000435201 TAS2R45P59539 299 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 UHRF2Q96PU4 802 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 SPTA1P02549 2419 aa13.49□□□□□ -0.25
LIMK1-203ENST00000435201 BUB1B-PAK6H3BSN5 160 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 ACTL6BO94805 426 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 AREGP15514 252 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms