RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 OR13C7P0DN81 318 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 IGHV4-31P0DP07 118 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 RNASE2P10153 161 aaKnown RBP8.44□□□□□ -1.06
NEFM-202ENST00000433454 DLK1P80370 383 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 TMEM182Q6ZP80 229 aaPredicted RBP8.44□□□□□ -1.06
NEFM-202ENST00000433454 SRSF12Q8WXF0 261 aaKnown RBP8.44□□□□□ -1.06
NEFM-202ENST00000433454 TAF15Q92804 592 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEFM-202ENST00000433454 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
NEFM-202ENST00000433454 C1RLQ9NZP8 487 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 FAM96BQ9Y3D0 163 aa8.44□□□□□ -1.06
NEFM-202ENST00000433454 A0A0U1RQK1 487 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 SMCO3A2RU48 225 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 FCN1O00602 326 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 CNIH1O95406 144 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
NEFM-202ENST00000433454 HSD17B13Q7Z5P4 300 aaPredicted RBP8.43□□□□□ -1.06
NEFM-202ENST00000433454 COMMD7Q86VX2 200 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 PSMG3Q9BT73 122 aaPredicted RBP8.43□□□□□ -1.06
NEFM-202ENST00000433454 RSG1Q9BU20 258 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 TRIM77I1YAP6 450 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 PRH1P02810 166 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 FGF7P21781 194 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
NEFM-202ENST00000433454 FAM120AOSQ5T036 256 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
NEFM-202ENST00000433454 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
NEFM-202ENST00000433454 PRRC2AP48634 2157 aaKnown RBP8.42□□□□□ -1.06
NEFM-202ENST00000433454 CELSR1Q9NYQ6 3014 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 CSPG4Q6UVK1 2322 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 AVPP01185 164 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 BLOC1S1P78537 153 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 KLF17Q5JT82 389 aaPredicted RBP8.42□□□□□ -1.06
NEFM-202ENST00000433454 MEGF9Q9H1U4 602 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 TIMM9Q9Y5J7 89 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 ABCA1O95477 2261 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 FNDC10F2Z333 226 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 MPDU1O75352 247 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 FBP1P09467 338 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 CAMLGP49069 296 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 AKR1C8PQ5T2L2 129 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 PXDC1Q5TGL8 231 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 BTNL8Q6UX41 500 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 Q6ZRG5 221 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 P2RX4Q99571 388 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 NPCDR1Q9BY65 106 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 PARP11Q9NR21 331 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 WDR83OSQ9Y284 106 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 FBXO7Q9Y3I1 522 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
NEFM-202ENST00000433454 PDZD2O15018 2839 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 REG1AP05451 166 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 AREGP15514 252 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 MDKP21741 143 aaPredicted RBP8.41□□□□□ -1.06
NEFM-202ENST00000433454 SERF2P84101 59 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 FXYD3Q14802 87 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
NEFM-202ENST00000433454 ZNF709Q8N972 641 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 WFDC11Q8NEX6 87 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 RNASEH2CQ8TDP1 164 aaKnown RBP8.41□□□□□ -1.06
NEFM-202ENST00000433454 SSMEM1Q8WWF3 244 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 C17orf112F2Z3M2 114 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 APELAP0DMC3 54 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 FHITP49789 147 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 BPIFB3P59826 476 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 ZNF616Q08AN1 781 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 ZNF562Q6V9R5 426 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 FAM213BQ8TBF2 198 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 ABHD5Q8WTS1 349 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 ARPC1AQ92747 370 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 FOXC2Q99958 501 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 NPVFQ9HCQ7 196 aa8.41□□□□□ -1.06
NEFM-202ENST00000433454 FLNAP21333 2647 aaKnown RBP8.4□□□□□ -1.06
NEFM-202ENST00000433454 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 CX3CL1P78423 397 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 CD69Q07108 199 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 CYB5R2Q6BCY4 276 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 CENPVQ7Z7K6 275 aaPredicted RBP8.4□□□□□ -1.06
NEFM-202ENST00000433454 Q8N9W7 124 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 OR1P1Q8NH06 330 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 CACNG8Q8WXS5 425 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.06
NEFM-202ENST00000433454 HLA-DRB1P01911 266 aa8.4□□□□□ -1.07
NEFM-202ENST00000433454 GPX4P36969 197 aaPredicted RBP8.4□□□□□ -1.07
NEFM-202ENST00000433454 OPRK1P41145 380 aa8.4□□□□□ -1.07
NEFM-202ENST00000433454 DPPA3Q6W0C5 159 aa8.4□□□□□ -1.07
NEFM-202ENST00000433454 SSX3Q99909 188 aa8.4□□□□□ -1.07
NEFM-202ENST00000433454 LSM4Q9Y4Z0 139 aaKnown RBP8.4□□□□□ -1.07
NEFM-202ENST00000433454 F11RQ9Y624 299 aaKnown RBP8.4□□□□□ -1.07
NEFM-202ENST00000433454 CORTO00230 105 aa8.39□□□□□ -1.07
NEFM-202ENST00000433454 S100A1P23297 94 aa8.39□□□□□ -1.07
NEFM-202ENST00000433454 ELLP55199 621 aaPredicted RBP8.39□□□□□ -1.07
NEFM-202ENST00000433454 TEPPQ6URK8 271 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms