RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 HILPDAQ9Y5L2 63 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 RBFOX3A6NFN3 312 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 CGB1A6NKQ9 187 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 PRSS47A8MTI9 375 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 IGHV2-5P01817 119 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 IGHV4-39P01824 125 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 OR13C7P0DN81 318 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
USHBP1-203ENST00000431146 ZNF787Q6DD87 383 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 LHFPL4Q7Z7J7 247 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 SVBPQ8N300 66 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 ZNF843Q8N446 348 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 VSTM2AQ8TAG5 236 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 MRGPRG-AS1Q2M3A8 158 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 VMA21Q3ZAQ7 101 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 GCSAMLQ5JQS6 135 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 C1orf159Q96HA4 380 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 KIAA1456Q9P272 454 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 AMMECR1Q9Y4X0 333 aaPredicted RBP13.42□□□□□ -0.26
USHBP1-203ENST00000431146 LRRK2Q5S007 2527 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 A0A1B0GV90 55 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 A0A1B0GW64 132 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 M0R1W7 72 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 HBE1P02100 147 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 NPBWR1P48145 328 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 DLK1P80370 383 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 OR10G4Q8NGN3 311 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 MGST2Q99735 147 aa13.42□□□□□ -0.26
USHBP1-203ENST00000431146 CELSR1Q9NYQ6 3014 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 A0A1W2PPI3 338 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 MAP1LC3B2A6NCE7 125 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 BTBD17A6NE02 478 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 MLANAQ16655 118 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 CLDND2Q8NHS1 167 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 MAP1LC3BQ9GZQ8 125 aa13.41□□□□□ -0.26
USHBP1-203ENST00000431146 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
USHBP1-203ENST00000431146 ZFP92A6NM28 416 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 TIMM23O14925 209 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
USHBP1-203ENST00000431146 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
USHBP1-203ENST00000431146 PRTN3P24158 256 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 CD24P25063 80 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 HTR1DP28221 377 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 CEBPGP53567 150 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 RXFP4Q8TDU9 374 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 SSMEM1Q8WWF3 244 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 MBD3L1Q8WWY6 194 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 CCL19Q99731 98 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 GGACTQ9BVM4 153 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 REG1AP05451 166 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 APELAP0DMC3 54 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 LGALS7P47929 136 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 WT1-ASQ06250 92 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 ICAM4Q14773 271 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 AKIRIN2Q53H80 203 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 TPTE2P1Q5T6R2 138 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 CENPEQ02224 2701 aa13.4□□□□□ -0.26
USHBP1-203ENST00000431146 UBE2CO00762 179 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 PSG5Q15238 335 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 MIC13Q5XKP0 118 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 TMPRSS5Q9H3S3 457 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 LPAR2Q9HBW0 351 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 NPVFQ9HCQ7 196 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 DPM3Q9P2X0 92 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 LMO4P61968 165 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 GNB1P62873 340 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 TNXAQ16473 311 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 C2orf83Q53S99 150 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 PFDN5Q99471 154 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 ABCA2Q9BZC7 2435 aa13.39□□□□□ -0.27
USHBP1-203ENST00000431146 ODF3BA8MYP8 253 aa13.38□□□□□ -0.27
USHBP1-203ENST00000431146 ERHP84090 104 aaKnown RBP13.38□□□□□ -0.27
USHBP1-203ENST00000431146 FBLN7Q53RD9 439 aa13.38□□□□□ -0.27
USHBP1-203ENST00000431146 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
USHBP1-203ENST00000431146 METTL1Q9UBP6 276 aaKnown RBP13.38□□□□□ -0.27
USHBP1-203ENST00000431146 SIGLEC9Q9Y336 463 aa13.38□□□□□ -0.27
USHBP1-203ENST00000431146 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
USHBP1-203ENST00000431146 KPTNQ9Y664 436 aa13.38□□□□□ -0.27
USHBP1-203ENST00000431146 YIF1AO95070 293 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 MBP02144 154 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 HOXB4P17483 251 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms