RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TOMM20LQ6UXN7 152 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 ADAMTS20P59510 1910 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM178BH3BS89 294 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 K7ENP7 123 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 THBDP07204 575 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 PUSL1Q8N0Z8 303 aaKnown RBP9.62□□□□□ -0.87
PTCH1-208ENST00000430669 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-208ENST00000430669 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 NCOR1P1Q9H4R4 102 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 ANAPC10Q9UM13 185 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 UFC1Q9Y3C8 167 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 NBL1P41271 181 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 ID3Q02535 119 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 CLDND2Q8NHS1 167 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 RPRMQ9NS64 109 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 GPR179Q6PRD1 2367 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 A0A1B0GW64 132 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF525Q8N782 197 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 NBR2O15453 112 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 CA7P43166 264 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 DTX1Q86Y01 620 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 RNF5Q99942 180 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 RARRES2Q99969 163 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
PTCH1-208ENST00000430669 HEPN1Q6WQI6 88 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 FNDC10F2Z333 226 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 IER3P46695 156 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 OOSP1A8MZH6 123 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 M0R1W7 72 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 SPINK4O60575 86 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1D-33P01593 117 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1-33P01594 117 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 FCGR2BP31994 310 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 GATA4P43694 442 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF253O75346 499 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 EBLN2Q6P2I7 272 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 PARD6GQ9BYG4 376 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 IL6RP08887 468 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 RPL29P47914 159 aaKnown RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 TWIST1Q15672 202 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 SAPCD1Q5SSQ6 148 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 TUBA4BQ9H853 241 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM189A5PLL7 270 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 GSX1Q9H4S2 264 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-208ENST00000430669 MALRD1Q5VYJ5 2156 aa9.61□□□□□ -0.87
PTCH1-208ENST00000430669 REG1AP05451 166 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 LCN2P80188 198 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF880Q6PDB4 577 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 SLC25A48Q6ZT89 311 aaKnown RBP9.6□□□□□ -0.87
PTCH1-208ENST00000430669 WFIKKN1Q96NZ8 548 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 SAA1P0DJI8 122 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-208ENST00000430669 TDGF1P13385 188 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM208Q9BTX3 173 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
PTCH1-208ENST00000430669 NHLH1Q02575 133 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 CYB5R2Q6BCY4 276 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 IGLV3-1P01715 115 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
PTCH1-208ENST00000430669 SOX21Q9Y651 276 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-208ENST00000430669 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
PTCH1-208ENST00000430669 MFAP2P55001 183 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 A0A1B0GW15 77 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PKIAP61925 76 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 COL4A2P08572 1712 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 IGHV3-21A0A0B4J1V1 117 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 SIAH2O43255 324 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 FGF16O43320 207 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 GCGP01275 180 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 NPPCP23582 126 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
PTCH1-208ENST00000430669 NPIPB3Q92617 1050 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PGPA6NDG6 321 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 DKK1O94907 266 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 LMO1P25800 156 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 TSPOP30536 169 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PVRIGQ6DKI7 326 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PHOX2AO14813 284 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PF4V1P10720 104 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 CD99P14209 185 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 Q6AWC8 147 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 PPP1R27Q86WC6 154 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF738Q8NE65 137 aa9.59□□□□□ -0.87
PTCH1-208ENST00000430669 SRD5A3Q9H8P0 318 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms