RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 WT1-ASQ06250 92 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 ARL16Q0P5N6 197 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 RAB31Q13636 194 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 OR8G2PQ6IF36 304 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 SLC25A24Q6NUK1 477 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 TMEM170AQ8WVE7 144 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
NR1I3-209ENST00000428574 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
NR1I3-209ENST00000428574 RASL11BQ9BPW5 248 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 HINT2Q9BX68 163 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 WDR61Q9GZS3 305 aaKnown RBP7.22□□□□□ -1.25
NR1I3-209ENST00000428574 NPVFQ9HCQ7 196 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 FBXO7Q9Y3I1 522 aa7.22□□□□□ -1.25
NR1I3-209ENST00000428574 F11RQ9Y624 299 aaKnown RBP7.22□□□□□ -1.25
NR1I3-209ENST00000428574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.22□□□□□ -1.25
NR1I3-209ENST00000428574 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.25
NR1I3-209ENST00000428574 A0A1B0GW64 132 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 A6NDX4 124 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CD5LO43866 347 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CNIH1O95406 144 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 BRI3O95415 125 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 MBP02144 154 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 NMBP08949 121 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 OR13C7P0DN81 318 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 ATP6V0CP27449 155 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CX3CL1P78423 397 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 PJVKQ0ZLH3 352 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 FXYD3Q14802 87 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 SPINK9Q5DT21 86 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 HIST2H2BCQ6DN03 193 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 BRD3OSQ6XYD6 125 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 TMEM144Q7Z5S9 345 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 C5orf56Q8N8D9 126 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 PIFOQ8TCI5 191 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 TMED6Q8WW62 240 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 ARPC1AQ92747 370 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 P2RX4Q99571 388 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 PARP11Q9NR21 331 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
NR1I3-209ENST00000428574 TACC2O95359 2948 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CRYBG3Q68DQ2 2970 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
NR1I3-209ENST00000428574 CENPEQ02224 2701 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 BTBD17A6NE02 478 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 NCBP2LA6PVI3 153 aaKnown RBP7.2□□□□□ -1.26
NR1I3-209ENST00000428574 E7EUB6 86 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 AVPP01185 164 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 FAM157CP0CG43 387 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
NR1I3-209ENST00000428574 CTRB1P17538 263 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 HNF1AP20823 631 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 OPRK1P41145 380 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 CD69Q07108 199 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 CTRB2Q6GPI1 263 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 TEPPQ6URK8 271 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 TTC9CQ8N5M4 171 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 TMEM86BQ8N661 226 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 COMMD1Q8N668 190 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 HSD17B11Q8NBQ5 300 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 OR10W1Q8NGF6 305 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 SGMS2Q8NHU3 365 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 SSMEM1Q8WWF3 244 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 C22orf15Q8WYQ4 148 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 SSX3Q99909 188 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 SLC25A33Q9BSK2 321 aa7.2□□□□□ -1.26
NR1I3-209ENST00000428574 ABCA12Q86UK0 2595 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 IGHV7-81A0A0B4J1V7 117 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 UBE2L5PA0A1B0GUS4 154 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 FBXO24O75426 580 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 MYOD1P15172 320 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 SELENOTP62341 195 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 HNF4GQ14541 408 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 AKIRIN2Q53H80 203 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 C10orf55Q5SWW7 151 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 AKR1C8PQ5T2L2 129 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 BTNL8Q6UX41 500 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 TREML4Q6UXN2 200 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 CLEC9AQ6UXN8 241 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 EIF4E3Q8N5X7 224 aaKnown RBP7.19□□□□□ -1.26
NR1I3-209ENST00000428574 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 LFNGQ8NES3 379 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 LYPD6BQ8NI32 183 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
NR1I3-209ENST00000428574 C19orf24Q9BVV8 132 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 THYN1Q9P016 225 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
NR1I3-209ENST00000428574 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
NR1I3-209ENST00000428574 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
NR1I3-209ENST00000428574 TRAV1-1A0A0B4J248 108 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms