RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 C2orf83Q53S99 150 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 MRPL41Q8IXM3 137 aaKnown RBP9.84□□□□□ -0.83
TRIM39-207ENST00000428404 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 TMEM252Q8N6L7 170 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 ZNF114Q8NC26 417 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 DCUN1D4Q92564 292 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 TMEM68Q96MH6 324 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 AQP10Q96PS8 301 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 JMJD8Q96S16 334 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 FAM103A1Q9BTL3 118 aaKnown RBP9.84□□□□□ -0.83
TRIM39-207ENST00000428404 NPFFR1Q9GZQ6 430 aa9.84□□□□□ -0.83
TRIM39-207ENST00000428404 IGSF23A1L1A6 192 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 PMS2P5A8MQ11 134 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 NPIPB5A8MRT5 1133 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 CTRB1P17538 263 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 RPL12P30050 165 aaKnown RBP9.83□□□□□ -0.84
TRIM39-207ENST00000428404 HTR2BP41595 481 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 UBA52P62987 128 aaKnown RBP9.83□□□□□ -0.84
TRIM39-207ENST00000428404 RPP30P78346 268 aaKnown RBP9.83□□□□□ -0.84
TRIM39-207ENST00000428404 KLK9Q2XQG4 91 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 SPANXN5Q5MJ07 72 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 LAMTOR1Q6IAA8 161 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 ACOT7LQ6ZUV0 252 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 LFNGQ8NES3 379 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 P2RX4Q99571 388 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 PRSS22Q9GZN4 317 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 ZNF702PQ9H963 129 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 KLK9Q9UKQ9 250 aa9.83□□□□□ -0.84
TRIM39-207ENST00000428404 STRAPQ9Y3F4 350 aaKnown RBP9.83□□□□□ -0.84
TRIM39-207ENST00000428404 G3V318 75 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 H3BP45 60 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 TRIM77I1YAP6 450 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 AP4M1O00189 453 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 ARPC5O15511 151 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 IFNA10P01566 189 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 REG1AP05451 166 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 APELAP0DMC3 54 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 CXCL2P19875 107 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 NPY1RP25929 384 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 SNCAP37840 140 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 CAV2P51636 162 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 MFAP2P55001 183 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 TMEM267Q0VDI3 215 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-207ENST00000428404 LGALSLQ3ZCW2 172 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-207ENST00000428404 C9orf152Q5JTZ5 239 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 STPG2Q8N412 459 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 INO80EQ8NBZ0 244 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-207ENST00000428404 SLC24A4Q8NFF2 622 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 OR1P1Q8NH06 330 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 MFFQ9GZY8 342 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 SLC25A31Q9H0C2 315 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 DMRT1Q9Y5R6 373 aa9.82□□□□□ -0.84
TRIM39-207ENST00000428404 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
TRIM39-207ENST00000428404 PRSS46E5RG02 174 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 FBXO24O75426 580 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 TSPAN9O75954 239 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 HNRNPCP07910 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 EIF2B2P49770 351 aaKnown RBP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 SULT1A1P50225 295 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 NKX2-5P52952 324 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 SUB1P53999 127 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 EWSR1Q01844 656 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 NHLH2Q02577 135 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 BAXQ07812 192 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 ARL16Q0P5N6 197 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 OR2F1Q13607 317 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 ZNF345Q14585 488 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 UNQ5815/PRO19632Q6UWF5 114 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 KCNRGQ8N5I3 272 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 FAM110DQ8TAY7 271 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 ABHD5Q8WTS1 349 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 BSCL2Q96G97 398 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-207ENST00000428404 WNT10AQ9GZT5 417 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 HSPB11Q9Y547 144 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
TRIM39-207ENST00000428404 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 A0A0D9SG52 128 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 TCF21O43680 179 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 CST7O76096 145 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 BRI3O95415 125 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 METTL15P1P0C7V9 234 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 PPIFP30405 207 aaKnown RBP9.8□□□□□ -0.84
TRIM39-207ENST00000428404 NUP62P37198 522 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-207ENST00000428404 CFHR3Q02985 330 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 C19orf35Q6ZS72 473 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 Q6ZSV7 163 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 OR1L6Q8NGR2 347 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-207ENST00000428404 FANCD2OSQ96PS1 177 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 SERTAD4Q9NUC0 356 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 CUBNO60494 3623 aa9.8□□□□□ -0.84
TRIM39-207ENST00000428404 IGLV11-55A0A075B6I3 123 aa9.79□□□□□ -0.84
TRIM39-207ENST00000428404 SOX15O60248 233 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms