RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SELLP14151 372 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 QRFPP83859 136 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 OR1L8Q8NGR8 309 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 LYRM2Q9NU23 88 aaPredicted RBP8.9□□□□□ -0.98
TCOF1-204ENST00000427724 BET1LQ9NYM9 111 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 MTCH1Q9NZJ7 389 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 WASHC3Q9Y3C0 194 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 CELSR3Q9NYQ7 3312 aa8.9□□□□□ -0.99
TCOF1-204ENST00000427724 IGSF23A1L1A6 192 aa8.9□□□□□ -0.99
TCOF1-204ENST00000427724 FAM89BQ8N5H3 189 aa8.9□□□□□ -0.99
TCOF1-204ENST00000427724 IL36RNQ9UBH0 155 aa8.9□□□□□ -0.99
TCOF1-204ENST00000427724 CDC42EP3Q9UKI2 254 aa8.9□□□□□ -0.99
TCOF1-204ENST00000427724 FRYLO94915 3013 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 SRSF10O75494 262 aaKnown RBP8.89□□□□□ -0.99
TCOF1-204ENST00000427724 WNT5AP41221 380 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 PPOXP50336 477 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 BPIFB3P59826 476 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 LHFPL1Q86WI0 220 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 OR10G9Q8NGN4 311 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 OR10G7Q8NGN6 311 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 LINC00527Q9UJ94 153 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 ACANP16112 2415 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 GRIFINA4D1Z8 144 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 PAGE4O60829 102 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 IGKV1D-33P01593 117 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 IGKV1-33P01594 117 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 HINT1P49773 126 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-204ENST00000427724 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
TCOF1-204ENST00000427724 ZNF331Q9NQX6 463 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-204ENST00000427724 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 TRBV6-7A0A0A0MS04 114 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 J3KRW8 73 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 ERVFC1-1P60608 527 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 RPEL1Q2QD12 228 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 DNM1P46Q6ZS02 220 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 PCDH15Q96QU1 1955 aa8.89□□□□□ -0.99
TCOF1-204ENST00000427724 IGHV3-11P01762 117 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 JOSD1Q15040 202 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-204ENST00000427724 OR4X1Q8NH49 305 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 SPRY4Q9C004 299 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 ZNF581Q9P0T4 197 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 J3QR06 171 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 EREGO14944 169 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 H1FOOQ8IZA3 346 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-204ENST00000427724 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 SGMS2Q8NHU3 365 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 PGLYRP1O75594 196 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-204ENST00000427724 CT45A10P0DMU9 189 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 CCL1P22362 96 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 ADORA2A-AS1P86434 159 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-204ENST00000427724 A0A1B0GU03 582 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 IGHV2-5P01817 119 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 TRGV3P03979 118 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
TCOF1-204ENST00000427724 FXYD3Q14802 87 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 IGFL2Q6UWQ7 119 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 Q8NA96 180 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
TCOF1-204ENST00000427724 WIPF3A6NGB9 483 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 DIRC3C9JPN6 131 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 C11orf94C9JXX5 98 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 ZNF253O75346 499 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 HPRT1P00492 218 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 MSMBP08118 114 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 TMEM219Q86XT9 240 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 MMD2Q8IY49 270 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 FBXL15Q9H469 300 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 H3BUX3 64 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 AMBPP02760 352 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 TCL1AP56279 114 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 HGFACQ04756 655 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 SRSF4Q08170 494 aaKnown RBP8.87□□□□□ -0.99
TCOF1-204ENST00000427724 FAM106AQ4KMX7 169 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 ZNF664Q8N3J9 261 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 RBKSQ9H477 322 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 WFDC1Q9HC57 220 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 WISP2O76076 250 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 VDAC2P45880 294 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-204ENST00000427724 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 SSMEM1Q8WWF3 244 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 BEX4Q9NWD9 120 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-204ENST00000427724 BPTFQ12830 3046 aa8.87□□□□□ -0.99
TCOF1-204ENST00000427724 H0Y980 276 aa8.86□□□□□ -0.99
TCOF1-204ENST00000427724 TAS2R45P59539 299 aa8.86□□□□□ -0.99
TCOF1-204ENST00000427724 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
TCOF1-204ENST00000427724 WDR82Q6UXN9 313 aa8.86□□□□□ -0.99
TCOF1-204ENST00000427724 TMEM204Q9BSN7 226 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms