RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CXorf65A6NEN9 183 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 DLL1O00548 723 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 TSPAN9O75954 239 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 CXorf1O96002 111 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 RHOBP62745 196 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 ADIRFQ15847 76 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 URGCP-MRPS24S4R325 110 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 INS-IGF2F8WCM5 200 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 LGALS7P47929 136 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRR20EP86478 221 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRR20CP86479 221 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRR20DP86480 221 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRR20BP86481 221 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRR20AP86496 221 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 CD69Q07108 199 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 GAMTQ14353 236 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 ELOBQ15370 118 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
APOBEC3D-202ENST00000427494 IGHV1-3A0A0C4DH29 117 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 C22orf46C9J442 243 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 LIPFP07098 398 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 AGAP20933 346 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 ATP5G3P48201 142 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 WT1-ASQ06250 92 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 MLANAQ16655 118 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 Q8WTZ3 238 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 AMMECR1Q9Y4X0 333 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 INSIG2Q9Y5U4 225 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
APOBEC3D-202ENST00000427494 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 LINC00869P0C866 280 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 OR10J1P30954 320 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 PNKDQ8N490 385 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 PDE6DO43924 150 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 ACTL6BO94805 426 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 CXCL1P09341 107 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 CNTFRP26992 372 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 MRGPRG-AS1Q2M3A8 158 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 DTX2Q86UW9 622 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 OR4P4Q8NGL7 312 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 NANPQ8TBE9 248 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 RPEQ96AT9 228 aa11.28□□□□□ -0.6
APOBEC3D-202ENST00000427494 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 CLDN34H7C241 214 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 GCHFRP30047 84 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 CHODLQ9H9P2 273 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 NBASA2RRP1 2371 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 F6UZH7 168 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 FOXH1O75593 365 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 REG1AP05451 166 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 NPPCP23582 126 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 GNB1P62873 340 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 FAM78BQ5VT40 261 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 RNASEH2CQ8TDP1 164 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 SSX3Q99909 188 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 PRELID1Q9Y255 219 aa11.27□□□□□ -0.61
APOBEC3D-202ENST00000427494 ABCA4P78363 2273 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 A0A1W2PPR1 153 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 MT-CO2P00403 227 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 S100A6P06703 90 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 ARF6P62330 175 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 PSG5Q15238 335 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 TNXAQ16473 311 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 PRSS8Q16651 343 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
APOBEC3D-202ENST00000427494 LRBAP50851 2863 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms