RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PDCD10Q9BUL8 212 aa19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 PLEKHA3Q9HB20 300 aa19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 PEF1Q9UBV8 284 aaKnown RBP19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 PLA2G10O15496 165 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 ST8SIA3O43173 380 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 LYRM1O43325 122 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 SLURP1P55000 103 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 ZNF846Q147U1 533 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 BEAN1Q3B7T3 259 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 FAM209BQ5JX69 171 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 KPRPQ5T749 579 aaPredicted RBP19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 LGI3Q8N145 548 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 THYN1Q9P016 225 aa19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 F11RQ9Y624 299 aaKnown RBP19.37■□□□□ 0.69
HERPUD2-205ENST00000427455 A0A0B4J2A0 478 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 NDUFB8O95169 186 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 ZP3P21754 424 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 PPP1R1AQ13522 171 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 AARDQ4LEZ3 155 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 Q6ZRM9 215 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 CACNG5Q9UF02 275 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 SHPKQ9UHJ6 478 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 DMRT1Q9Y5R6 373 aa19.36■□□□□ 0.69
HERPUD2-205ENST00000427455 IFNA17P01571 189 aa19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 TRBV12-3P01733 135 aa19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 HOXD3P31249 432 aaPredicted RBP19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 OR1L6Q8NGR2 347 aa19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 DCUN1D4Q92564 292 aa19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 GPR146Q96CH1 333 aa19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.35■□□□□ 0.69
HERPUD2-205ENST00000427455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 OVOL1O14753 267 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 SFT2D2O95562 160 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 OR2C3Q8N628 320 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 ZNF114Q8NC26 417 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 DLX4Q92988 240 aaPredicted RBP19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 EEF1AKMT3Q96AZ1 226 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 CXorf58Q96LI9 332 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 FLVCR2Q9UPI3 526 aa19.34■□□□□ 0.69
HERPUD2-205ENST00000427455 DUXBA0A1W2PPF3 345 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 INS-IGF2F8WCM5 200 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 ERHP84090 104 aaKnown RBP19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 SPINK9Q5DT21 86 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 NMSQ5H8A3 153 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 LYZL2Q7Z4W2 148 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 LRTM2Q8N967 370 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 OR1P1Q8NH06 330 aa19.33■□□□□ 0.68
HERPUD2-205ENST00000427455 MFSD2BA6NFX1 497 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 SEC14L6B5MCN3 397 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 SULT1A3P0DMM9 295 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 SULT1A4P0DMN0 295 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 HOXA1P49639 335 aaPredicted RBP19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 MFAP2P55001 183 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 ANKRD55Q3KP44 614 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 C9orf66Q5T8R8 295 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 SLC25A24Q6NUK1 477 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 OR52E5Q8NH55 327 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 CCDC140Q96MF4 163 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 DNAH3Q8TD57 4116 aa19.32■□□□□ 0.68
HERPUD2-205ENST00000427455 SPCS3P61009 180 aa19.31■□□□□ 0.68
HERPUD2-205ENST00000427455 DEFA6Q01524 100 aa19.31■□□□□ 0.68
HERPUD2-205ENST00000427455 C20orf85Q9H1P6 137 aa19.31■□□□□ 0.68
HERPUD2-205ENST00000427455 CACFD1Q9UGQ2 172 aa19.31■□□□□ 0.68
HERPUD2-205ENST00000427455 TRBV7-1A0A0A6YYK4 115 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 BMPR1BO00238 502 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 WIPF1O43516 503 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 UPK1BO75841 260 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 HLA-AP01891 365 aaKnown RBP19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 RPEL1Q2QD12 228 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 PDLIM3Q53GG5 364 aaPredicted RBP19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 VN1R17PQ8TDU5 208 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 ENY2Q9NPA8 101 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 S4R3C0 116 aa19.3■□□□□ 0.68
HERPUD2-205ENST00000427455 C9orf170A2RU37 121 aa19.29■□□□□ 0.68
HERPUD2-205ENST00000427455 IGHV3-23P01764 117 aa19.29■□□□□ 0.68
HERPUD2-205ENST00000427455 ASAH1Q13510 395 aa19.29■□□□□ 0.68
HERPUD2-205ENST00000427455 SMCO1Q147U7 214 aa19.29■□□□□ 0.68
HERPUD2-205ENST00000427455 TBC1D24Q9ULP9 559 aa19.29■□□□□ 0.68
HERPUD2-205ENST00000427455 OR4E1P0C645 316 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 ANXA7P20073 488 aaKnown RBP19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 SNCAP37840 140 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 DHRS2Q13268 280 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 KLF5Q13887 457 aaPredicted RBP19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 MZT2BQ6NZ67 158 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 CLEC19AQ6UXS0 136 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 ZNF502Q8TBZ5 544 aa19.28■□□□□ 0.68
HERPUD2-205ENST00000427455 A0A1B0GU03 582 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 PPP5D1E7EU14 171 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 TCRBP04435 133 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 INSL3P51460 131 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 EGFEM1PQ0D2K5 195 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 C4orf46Q504U0 113 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 LYG2Q86SG7 212 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 TMED3Q9Y3Q3 217 aa19.27■□□□□ 0.68
HERPUD2-205ENST00000427455 K7EIM0 57 aa19.26■□□□□ 0.67
HERPUD2-205ENST00000427455 GGCTO75223 188 aaKnown RBP19.26■□□□□ 0.67
HERPUD2-205ENST00000427455 ARL3P36405 182 aa19.26■□□□□ 0.67
HERPUD2-205ENST00000427455 SYNJ2BPP57105 145 aa19.26■□□□□ 0.67
HERPUD2-205ENST00000427455 TATDN3Q17R31 274 aa19.26■□□□□ 0.67
HERPUD2-205ENST00000427455 ACSM6Q6P461 480 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms