RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TNFSF8P32971 234 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 SURF2Q15527 256 aaPredicted RBP13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 PLET1Q6UQ28 207 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 OR4C16Q8NGL9 310 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 PRRT1Q99946 306 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 NXF2Q9GZY0 626 aaKnown RBP13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 ZC4H2Q9NQZ6 224 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 U3KQK5 164 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 TENM3Q9P273 2699 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 HSPE1P61604 102 aaKnown RBP13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 PRCDQ00LT1 54 aa13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 Q8N1Y9 231 aa13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 RNASE11Q8TAA1 199 aaKnown RBP13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 PLEKHA3Q9HB20 300 aa13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 PALMDQ9NP74 551 aa13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 TECRQ9NZ01 308 aaKnown RBP13.26□□□□□ -0.29
SLC6A1-202ENST00000425938 TEX13DA0A0J9YY54 714 aaPredicted RBP13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 IGKV1-5P01602 117 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 IGHV4-30-4P0DP06 118 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 UCP1P25874 307 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 MFAP2P55001 183 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 ERHP84090 104 aaKnown RBP13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 SP6Q3SY56 376 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 CD300EQ496F6 205 aaPredicted RBP13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 ADAMTSL5Q6ZMM2 481 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 OR2C3Q8N628 320 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 ATP6V0BQ99437 205 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 PDCD10Q9BUL8 212 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 C21orf62Q9NYP8 219 aa13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
SLC6A1-202ENST00000425938 IZUMO1RA6ND01 250 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 OR2T8A6NH00 312 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 A8MWP6 167 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 TGOLN2O43493 480 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 CBLN1P23435 193 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 DEFB114Q30KQ6 69 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 OR51S1Q8NGJ8 323 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 SCARB1Q8WTV0 552 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 SOSTQ9BQB4 213 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 SCP2D1Q9UJQ7 156 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 KMT2CQ8NEZ4 4911 aaKnown RBP13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 STAB2Q8WWQ8 2551 aa13.24□□□□□ -0.29
SLC6A1-202ENST00000425938 IGHV3-21A0A0B4J1V1 117 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 TMEM213A2RRL7 107 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 IFNA17P01571 189 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 S100A5P33763 92 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 SBSPONQ8IVN8 264 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 SLC35G3Q8N808 338 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 MARC2Q969Z3 335 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 SCGB3A2Q96PL1 93 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 RTBDNQ9BSG5 229 aaPredicted RBP13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 THAP7Q9BT49 309 aaPredicted RBP13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 C5orf66Q9H5L9 145 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 MCUBQ9NWR8 336 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 SLC2A8Q9NY64 477 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 UFC1Q9Y3C8 167 aa13.23□□□□□ -0.29
SLC6A1-202ENST00000425938 IGHV3-35A0A0C4DH35 117 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 A8MZ25 164 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 K7EIM0 57 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 OR5AC1P0C628 307 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 P0C879 139 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 EDN2P20800 178 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 DHODHQ02127 395 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 GUCA2BQ16661 112 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 Q56UQ5 140 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 ZNF57Q68EA5 555 aaPredicted RBP13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 UNQ9165/PRO28630Q6UXU0 137 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 UBAC2Q8NBM4 344 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 UXS1Q8NBZ7 420 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 ZNF436Q9C0F3 470 aaPredicted RBP13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 TMEM222Q9H0R3 208 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 TUBA4BQ9H853 241 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 ZMAT4Q9H898 229 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 GPR132Q9UNW8 380 aa13.22□□□□□ -0.29
SLC6A1-202ENST00000425938 A0A0B4J293 547 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 CDS2O95674 445 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 SNCAP37840 140 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 ELLP55199 621 aaPredicted RBP13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 CD81P60033 236 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 TM4SF20Q53R12 229 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 FAM219AQ8IW50 185 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
SLC6A1-202ENST00000425938 CRYM-AS1A6NIL9 109 aa13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms