RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 SIGLEC9Q9Y336 463 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 IGHV3-72A0A0B4J1Y9 119 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 MAP1LC3B2A6NCE7 125 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 TIMM23O14925 209 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 NBR2O15453 112 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 VENTXO95231 258 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 HSPB1P04792 205 aaKnown RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 CRYGBP07316 175 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 RNASE2P10153 161 aaKnown RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 SLC25A16P16260 332 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 ZFP36P26651 326 aaKnown RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 RPL29P47914 159 aaKnown RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 FHITP49789 147 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 PAX2Q02962 417 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 TNXAQ16473 311 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 ZNF506Q5JVG8 444 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 C10orf91Q5T1B1 145 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 NANPQ8TBE9 248 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 RCC1LQ96I51 464 aaKnown RBP7.61□□□□□ -1.19
HMGB4-201ENST00000425537 MAP1LC3BQ9GZQ8 125 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 MANBALQ9NQG1 85 aa7.61□□□□□ -1.19
HMGB4-201ENST00000425537 HRNRQ86YZ3 2850 aaPredicted RBP7.6□□□□□ -1.19
HMGB4-201ENST00000425537 VWC2LB2RUY7 222 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 SEC14L6B5MCN3 397 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 CNIH1O95406 144 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 OPN1MWP04001 364 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 FAM106CPP0CH98 169 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 OPN1MW2P0DN77 364 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 OPN1MW3P0DN78 364 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 OR13C7P0DN81 318 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 CDC34P49427 236 aaPredicted RBP7.6□□□□□ -1.19
HMGB4-201ENST00000425537 PSMB3P49720 205 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 CD69Q07108 199 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 HES1Q14469 280 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 HNF4GQ14541 408 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 MMDQ15546 238 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 TMEM249Q2WGJ8 235 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 SPSB3Q6PJ21 355 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 ZNF114Q8NC26 417 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 NPBQ8NG41 125 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 SUN5Q8TC36 379 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 RNF2Q99496 336 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 P2RX4Q99571 388 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 TMEM231Q9H6L2 316 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 FAM96BQ9Y3D0 163 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 HILPDAQ9Y5L2 63 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
HMGB4-201ENST00000425537 FBN2P35556 2912 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 TET2Q6N021 2002 aaPredicted RBP7.59□□□□□ -1.19
HMGB4-201ENST00000425537 NDUFA3O95167 84 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 GATA3P23771 443 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 SELENOTP62341 195 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 RHOBP62745 196 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 KLRD1Q13241 179 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 SOHLH1Q5JUK2 328 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 HCP5Q6MZN7 132 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 FAM122CQ6P4D5 195 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 LCN15Q6UWW0 184 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 SLC16A13Q7RTY0 426 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 OR1P1Q8NH06 330 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 TMEM170AQ8WVE7 144 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 CFHR4Q92496 578 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 TXNDC17Q9BRA2 123 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 GGTLC1Q9BX51 225 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 NKX6-2Q9C056 277 aaPredicted RBP7.59□□□□□ -1.19
HMGB4-201ENST00000425537 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
HMGB4-201ENST00000425537 LSM4Q9Y4Z0 139 aaKnown RBP7.59□□□□□ -1.19
HMGB4-201ENST00000425537 LOC102723971A0A1B0GUV8 181 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 A0A1B0GV50 99 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 NPFFO15130 113 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 CXorf1O96002 111 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 IGKV1D-33P01593 117 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 IGKV1-33P01594 117 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 FABP1P07148 127 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 BCL2P10415 239 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 MYOD1P15172 320 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 B2MP61769 119 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 GNB1P62873 340 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 EBI3Q14213 229 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 SSX2Q16385 188 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 HAGHQ16775 308 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 ARSJQ5FYB0 599 aaPredicted RBP7.58□□□□□ -1.2
HMGB4-201ENST00000425537 ACSM6Q6P461 480 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 SLC35E3Q7Z769 313 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 RPP25LQ8N5L8 163 aaKnown RBP7.58□□□□□ -1.2
HMGB4-201ENST00000425537 OR10W1Q8NGF6 305 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
HMGB4-201ENST00000425537 MGST2Q99735 147 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 FBXL15Q9H469 300 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 BEX4Q9NWD9 120 aaPredicted RBP7.58□□□□□ -1.2
HMGB4-201ENST00000425537 GNG13Q9P2W3 67 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 RFNGQ9Y644 331 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 ADGRG4Q8IZF6 3080 aa7.58□□□□□ -1.2
HMGB4-201ENST00000425537 TRAV20A0A0B4J274 112 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 IGLC7A0M8Q6 106 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 B4DSR2 109 aa7.57□□□□□ -1.2
HMGB4-201ENST00000425537 SCGB2A1O75556 95 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms