RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
DDR1-234ENST00000424544 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
DDR1-234ENST00000424544 RBMXL2O75526 392 aaKnown RBP12.36□□□□□ -0.43
DDR1-234ENST00000424544 OR2A4O95047 310 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 HOXB5P09067 269 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 VSTM2AQ8TAG5 236 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
DDR1-234ENST00000424544 OR2A7Q96R45 310 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 RYR2Q92736 4967 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 CSMD3Q7Z407 3707 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 STARD9Q9P2P6 4700 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
DDR1-234ENST00000424544 A0A0G2JLM5 398 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 A8MZ25 164 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 C3orf84H3BNL1 204 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 SSNA1O43805 119 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 CNIH1O95406 144 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 LY86O95711 162 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 IFNA21P01568 189 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 IL6RP08887 468 aaPredicted RBP12.35□□□□□ -0.43
DDR1-234ENST00000424544 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 SAA1P0DJI8 122 aaPredicted RBP12.35□□□□□ -0.43
DDR1-234ENST00000424544 AKR1C2P52895 323 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 FAM219AQ8IW50 185 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
DDR1-234ENST00000424544 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
DDR1-234ENST00000424544 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 BET1LQ9NYM9 111 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 TMED3Q9Y3Q3 217 aa12.35□□□□□ -0.43
DDR1-234ENST00000424544 UPK2O00526 184 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 PFDN1O60925 122 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 ZP3P21754 424 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 PRSS8Q16651 343 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 GGNBP1Q5YKI7 109 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 ELOVL1Q9BW60 279 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
DDR1-234ENST00000424544 C13orf42A0A1B0GVH6 325 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 MSGN1A6NI15 193 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 ADAP1O75689 374 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 SNAPC5O75971 98 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 P0C879 139 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 HLA-GP17693 338 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 MED28Q9H204 178 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 ZNF355PQ9NSJ1 428 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 C19orf73Q9NVV2 129 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 SIGLEC8Q9NYZ4 499 aa12.33□□□□□ -0.44
DDR1-234ENST00000424544 TRBV9A0A0B4J1U6 114 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 KBTBD11O94819 623 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 Q6ZRM9 215 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 MMD2Q8IY49 270 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 OR4A16Q8NH70 328 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 TM2D3Q9BRN9 247 aa12.32□□□□□ -0.44
DDR1-234ENST00000424544 PEF1Q9UBV8 284 aaKnown RBP12.32□□□□□ -0.44
DDR1-234ENST00000424544 A0A1B0GU03 582 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 SLC25A6P12236 298 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 LYSTQ99698 3801 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
DDR1-234ENST00000424544 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.31□□□□□ -0.44
DDR1-234ENST00000424544 ANKRD34BA5PLL1 514 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 C5orf51A6NDU8 294 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 FAM25EA8MYX2 175 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 CCSO14618 274 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 CSN3P07498 182 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 SULT1A3P0DMM9 295 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 SULT1A4P0DMN0 295 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 MAS1LP35410 378 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
DDR1-234ENST00000424544 RPL8P62917 257 aaKnown RBP12.3□□□□□ -0.44
DDR1-234ENST00000424544 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
DDR1-234ENST00000424544 GSG1LQ6UXU4 331 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 TTC9CQ8N5M4 171 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 SRSF12Q8WXF0 261 aaKnown RBP12.3□□□□□ -0.44
DDR1-234ENST00000424544 ZNF430Q9H8G1 570 aaPredicted RBP12.3□□□□□ -0.44
DDR1-234ENST00000424544 COA4Q9NYJ1 87 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 FKBP11Q9NYL4 201 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 MGAT4CQ9UBM8 478 aa12.3□□□□□ -0.44
DDR1-234ENST00000424544 CACNG5Q9UF02 275 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms