RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 OR5AU1Q8NGC0 362 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 TMEM68Q96MH6 324 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 MS4A10Q96PG2 267 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 NMES1Q9C002 83 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
DDX55-203ENST00000421670 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
DDX55-203ENST00000421670 WRBO00258 174 aa12.27□□□□□ -0.44
DDX55-203ENST00000421670 PF4V1P10720 104 aa12.27□□□□□ -0.44
DDX55-203ENST00000421670 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.44
DDX55-203ENST00000421670 IL15RAQ13261 267 aa12.27□□□□□ -0.44
DDX55-203ENST00000421670 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.44
DDX55-203ENST00000421670 WFDC12Q8WWY7 111 aa12.27□□□□□ -0.44
DDX55-203ENST00000421670 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.44
DDX55-203ENST00000421670 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 K7EPK0 472 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 MED6O75586 246 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 CRYGCP07315 174 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 DEFA4P12838 97 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 PSMB8P28062 276 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 MFAP2P55001 183 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 KRTAP10-3P60369 221 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 SRSF4Q08170 494 aaKnown RBP12.26□□□□□ -0.45
DDX55-203ENST00000421670 TEX38Q6PEX7 206 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 P2RX4Q99571 388 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 ZNF436Q9C0F3 470 aaPredicted RBP12.26□□□□□ -0.45
DDX55-203ENST00000421670 KLK15Q9H2R5 256 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 HIPK2Q9H2X6 1198 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 F11RQ9Y624 299 aaKnown RBP12.26□□□□□ -0.45
DDX55-203ENST00000421670 ANK2Q01484 3957 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 H3BP45 60 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 SNCAP37840 140 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 TCTEX1D4Q5JR98 221 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 ZNF114Q8NC26 417 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 OR4X2Q8NGF9 303 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 PPP1R1CQ8WVI7 109 aa12.26□□□□□ -0.45
DDX55-203ENST00000421670 TMEM50AO95807 157 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
DDX55-203ENST00000421670 RNASE2P10153 161 aaKnown RBP12.25□□□□□ -0.45
DDX55-203ENST00000421670 CD28P10747 220 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 TPPP2P59282 170 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 CYCSP99999 105 aaKnown RBP12.25□□□□□ -0.45
DDX55-203ENST00000421670 FOXE3Q13461 319 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 SLC24A4Q8NFF2 622 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
DDX55-203ENST00000421670 OR2J3O76001 311 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 IFNA10P01566 189 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 TRGV3P03979 118 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 HTR2BP41595 481 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 CD83Q01151 205 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 TMEM170AQ8WVE7 144 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
DDX55-203ENST00000421670 VWFP04275 2813 aa12.24□□□□□ -0.45
DDX55-203ENST00000421670 IGLV11-55A0A075B6I3 123 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 H3BUA1 57 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 ELANEP08246 267 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
DDX55-203ENST00000421670 NPY1RP25929 384 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 RAB9AP51151 201 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 PAX9P55771 341 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 RHOGP84095 191 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 KHDC1LQ5JSQ8 128 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 SLC25A24Q6NUK1 477 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 MDFIQ99750 246 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
DDX55-203ENST00000421670 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 H0YIZ8 118 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 DEDDO75618 318 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 MISP3Q96FF7 219 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 C11orf1Q9H5F2 150 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 SLA2Q9H6Q3 261 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 PAIP2BQ9ULR5 123 aaKnown RBP12.22□□□□□ -0.45
DDX55-203ENST00000421670 IGHV3-21A0A0B4J1V1 117 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 C15orf62A8K5M9 175 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 L7N2F9 121 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 NDUFB8O95169 186 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 MPC2O95563 127 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 BCAP31P51572 246 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 SUB1P53999 127 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDX55-203ENST00000421670 VAMP2P63027 116 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 C2orf83Q53S99 150 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
DDX55-203ENST00000421670 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 CITED2Q99967 270 aaPredicted RBP12.22□□□□□ -0.45
DDX55-203ENST00000421670 FBXL7Q9UJT9 491 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 S4R3C0 116 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 U3KQ87 197 aa12.22□□□□□ -0.45
DDX55-203ENST00000421670 BRI3O95415 125 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 RAP2BP61225 183 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms