RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 OR10K2Q6IF99 312 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 NFE4Q86UQ8 179 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 FAM89BQ8N5H3 189 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 CCDC124Q96CT7 223 aaKnown RBP6.19□□□□□ -1.42
TRIM39-206ENST00000420746 RNF125Q96EQ8 232 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 HSD17B10Q99714 261 aaKnown RBP6.19□□□□□ -1.42
TRIM39-206ENST00000420746 COMMD5Q9GZQ3 224 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 SEPSECSQ9HD40 501 aaKnown RBP6.19□□□□□ -1.42
TRIM39-206ENST00000420746 MRPS16Q9Y3D3 137 aaKnown RBP6.19□□□□□ -1.42
TRIM39-206ENST00000420746 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
TRIM39-206ENST00000420746 IGHV3OR16-12A0A075B7B8 117 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 HELTA6NFD8 242 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 FOXI3A8MTJ6 420 aaPredicted RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 F5H768 121 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 DNAH10OSP0CZ25 163 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 OR13C7P0DN81 318 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 HLA-DRB4P13762 266 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 DCKP27707 260 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 RPL30P62888 115 aaKnown RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 QRFPP83859 136 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 RRN3P1Q2M238 152 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 OR2B11Q5JQS5 317 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 PSMG4Q5JS54 123 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 TOMM20LQ6UXN7 152 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 H1FOOQ8IZA3 346 aaPredicted RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 CADM3Q8N126 398 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 GINS4Q9BRT9 223 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 URM1Q9BTM9 101 aaKnown RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 RBMX2Q9Y388 322 aaKnown RBP6.18□□□□□ -1.42
TRIM39-206ENST00000420746 GOLT1BQ9Y3E0 138 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 HLA-DRB4X5D2U9 266 aa6.18□□□□□ -1.42
TRIM39-206ENST00000420746 IGHV3-66A0A0C4DH42 116 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 RAB27BO00194 218 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 SOCS1O15524 211 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 ATP5G1P05496 136 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 LIMS3P0CW19 117 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 LIMS4P0CW20 117 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 ATP5G3P48201 142 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 EIF2B2P49770 351 aaKnown RBP6.17□□□□□ -1.42
TRIM39-206ENST00000420746 MFAP4P55083 255 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 BRWD1-AS2P59051 145 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 SNRPD3P62318 126 aaKnown RBP6.17□□□□□ -1.42
TRIM39-206ENST00000420746 EIF4EBP1Q13541 118 aaPredicted RBP6.17□□□□□ -1.42
TRIM39-206ENST00000420746 POU2AF1Q16633 256 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 C1orf100Q5SVJ3 147 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 OR10W1Q8NGF6 305 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
TRIM39-206ENST00000420746 DERL3Q96Q80 235 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 LPAR5Q9H1C0 372 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 HRASLSQ9HDD0 168 aa6.17□□□□□ -1.42
TRIM39-206ENST00000420746 MRPS18AQ9NVS2 196 aaKnown RBP6.17□□□□□ -1.42
TRIM39-206ENST00000420746 TCRBV3S1A0A5B6 114 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 ERICH4A6NGS2 130 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 UPK2O00526 184 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 IGLV2-14P01704 120 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 TRAPPC2P0DI81 140 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 TRAPPC2BP0DI82 140 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 NPPCP23582 126 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 ASIPP42127 132 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 P2RY1P47900 373 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 TMEM50BP56557 158 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
TRIM39-206ENST00000420746 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 TMPRSS11AQ6ZMR5 421 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 ZNF600Q6ZNG1 722 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 TCTEX1D2Q8WW35 142 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 LSM10Q969L4 123 aaKnown RBP6.16□□□□□ -1.42
TRIM39-206ENST00000420746 PGLYRP3Q96LB9 341 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 PECRQ9BY49 303 aa6.16□□□□□ -1.42
TRIM39-206ENST00000420746 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 A0A1W2PPK0 400 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 SAC3D1A6NKF1 404 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 I3L2K1 104 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.42
TRIM39-206ENST00000420746 GNG7O60262 68 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 HLA-DQB1P01920 261 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 FCGR3AP08637 254 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 CRYBB3P26998 211 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 MAPK3P27361 379 aaPredicted RBP6.15□□□□□ -1.42
TRIM39-206ENST00000420746 AP2S1P53680 142 aaPredicted RBP6.15□□□□□ -1.42
TRIM39-206ENST00000420746 TAS2R31P59538 309 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 MRPS15P82914 257 aaKnown RBP6.15□□□□□ -1.42
TRIM39-206ENST00000420746 DHRS2Q13268 280 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 ESRGQ1W209 222 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 Q6ZS49 121 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 SPATA24Q86W54 205 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 ZNF709Q8N972 641 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 OR52I1Q8NGK6 324 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 OR1P1Q8NH06 330 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 Q96MT0 163 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 DCSTAMPQ9H295 470 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 ZNF446Q9NWS9 450 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 BABAM2Q9NXR7 383 aa6.15□□□□□ -1.42
TRIM39-206ENST00000420746 TNXBP22105 4242 aa6.15□□□□□ -1.43
TRIM39-206ENST00000420746 CBY3A6NI87 242 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms