RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 FBXL7Q9UJT9 491 aa13.61□□□□□ -0.23
EPCAM-203ENST00000419334 CYB5BO43169 146 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 VAMP1P23763 118 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 MECP2P51608 486 aaKnown RBP13.6□□□□□ -0.23
EPCAM-203ENST00000419334 PPP1R1AQ13522 171 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 FAM209BQ5JX69 171 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 GPR146Q96CH1 333 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 PDCD10Q9BUL8 212 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 THYN1Q9P016 225 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
EPCAM-203ENST00000419334 DMRT1Q9Y5R6 373 aa13.6□□□□□ -0.23
EPCAM-203ENST00000419334 F11RQ9Y624 299 aaKnown RBP13.6□□□□□ -0.23
EPCAM-203ENST00000419334 NOTCH1P46531 2555 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
EPCAM-203ENST00000419334 DUXBA0A1W2PPF3 345 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 INS-IGF2F8WCM5 200 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 NDUFB8O95169 186 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 SFT2D2O95562 160 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 SLURP1P55000 103 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 KPRPQ5T749 579 aaPredicted RBP13.59□□□□□ -0.23
EPCAM-203ENST00000419334 C1QL4Q86Z23 238 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 LRTM2Q8N967 370 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.59□□□□□ -0.23
EPCAM-203ENST00000419334 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 FLVCR2Q9UPI3 526 aa13.59□□□□□ -0.23
EPCAM-203ENST00000419334 ANKRD34BA5PLL1 514 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 UPK1BO75841 260 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 IFNA17P01571 189 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 ZP3P21754 424 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 HOXD3P31249 432 aaPredicted RBP13.58□□□□□ -0.24
EPCAM-203ENST00000419334 BEAN1Q3B7T3 259 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 LYZL2Q7Z4W2 148 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 ZNF114Q8NC26 417 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 OR52E5Q8NH55 327 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 DCUN1D4Q92564 292 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 DLX4Q92988 240 aaPredicted RBP13.58□□□□□ -0.24
EPCAM-203ENST00000419334 CXorf58Q96LI9 332 aa13.58□□□□□ -0.24
EPCAM-203ENST00000419334 TRBV12-3P01733 135 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 MFAP2P55001 183 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 ERHP84090 104 aaKnown RBP13.57□□□□□ -0.24
EPCAM-203ENST00000419334 ANKRD55Q3KP44 614 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 PDLIM3Q53GG5 364 aaPredicted RBP13.57□□□□□ -0.24
EPCAM-203ENST00000419334 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 OR1P1Q8NH06 330 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 EEF1AKMT3Q96AZ1 226 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 CACFD1Q9UGQ2 172 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 TBC1D24Q9ULP9 559 aa13.57□□□□□ -0.24
EPCAM-203ENST00000419334 C9orf170A2RU37 121 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 OVOL1O14753 267 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 HLA-AP01891 365 aaKnown RBP13.56□□□□□ -0.24
EPCAM-203ENST00000419334 TCRBP04435 133 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 OR4E1P0C645 316 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 SPCS3P61009 180 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 ASAH1Q13510 395 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 SPINK9Q5DT21 86 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 CCDC140Q96MF4 163 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 C20orf85Q9H1P6 137 aa13.56□□□□□ -0.24
EPCAM-203ENST00000419334 TRBV7-1A0A0A6YYK4 115 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 BMPR1BO00238 502 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 WIPF1O43516 503 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 ANXA7P20073 488 aaKnown RBP13.55□□□□□ -0.24
EPCAM-203ENST00000419334 DHRS2Q13268 280 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 SMCO1Q147U7 214 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 C9orf66Q5T8R8 295 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 MZT2BQ6NZ67 158 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 VN1R17PQ8TDU5 208 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 TMED3Q9Y3Q3 217 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 S4R3C0 116 aa13.55□□□□□ -0.24
EPCAM-203ENST00000419334 A0A1B0GU03 582 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
EPCAM-203ENST00000419334 KLF5Q13887 457 aaPredicted RBP13.54□□□□□ -0.24
EPCAM-203ENST00000419334 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 LYG2Q86SG7 212 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 ZNF502Q8TBZ5 544 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
EPCAM-203ENST00000419334 FAM240BA0A1B0GVZ2 78 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 SLC25A6P12236 298 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 SNCAP37840 140 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 IFITM3Q01628 133 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 CLEC19AQ6UXS0 136 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 COQ8AQ8NI60 647 aa13.53□□□□□ -0.24
EPCAM-203ENST00000419334 PPP5D1E7EU14 171 aa13.52□□□□□ -0.25
EPCAM-203ENST00000419334 K7EIM0 57 aa13.52□□□□□ -0.25
EPCAM-203ENST00000419334 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
EPCAM-203ENST00000419334 RNASE2P10153 161 aaKnown RBP13.52□□□□□ -0.25
EPCAM-203ENST00000419334 INSL3P51460 131 aa13.52□□□□□ -0.25
EPCAM-203ENST00000419334 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.251e-8■■■■□ 22.5
EPCAM-203ENST00000419334 DEFA6Q01524 100 aa13.52□□□□□ -0.25
EPCAM-203ENST00000419334 EGFEM1PQ0D2K5 195 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms