RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NPIPB9F8W1W9 429 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM250H0YL14 139 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 NPIPB7O75200 414 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 CRPP02741 224 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 CNTFRP26992 372 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 LTBRP36941 435 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 FAM131CQ96AQ9 280 aa9.48□□□□□ -0.89
PTCH1-205ENST00000418258 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 HLA-DRB1P01911 266 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 PLP1P60201 277 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 WFDC6Q9BQY6 131 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 SOX21Q9Y651 276 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-205ENST00000418258 KBTBD11-OT1A0A1B0GTJ5 212 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 PEX7O00628 323 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 RRHO14718 337 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 CD7P09564 240 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 J3QW42 95 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 OSR1Q8TAX0 266 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-205ENST00000418258 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 CTHRC1Q96CG8 243 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 LOC390937A0A1W2PQ73 354 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 TSPAN13O95857 204 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 CD24P25063 80 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 CXCL2P19875 107 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 HBBP68871 147 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 TMEM42Q69YG0 159 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 PAX1P15863 534 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 WDYHV1Q96HA8 205 aa9.47□□□□□ -0.89
PTCH1-205ENST00000418258 RIF1Q5UIP0 2472 aaKnown RBP9.46□□□□□ -0.89
PTCH1-205ENST00000418258 SRD5A1P18405 259 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 RAMP1O60894 148 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 WISP3O95389 354 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-205ENST00000418258 THBDP07204 575 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 GCHFRP30047 84 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 FAM71F2Q6NXP2 309 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.89
PTCH1-205ENST00000418258 IGKV1D-42A0A075B6H8 117 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 TRBV7-9A0A0J9YWB2 115 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 LEMD1Q68G75 181 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.9
PTCH1-205ENST00000418258 TRAV40A0A0B4J280 105 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 SLC25A20O43772 301 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 C1orf100Q5SVJ3 147 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 APCDD1LQ8NCL9 501 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 WDR90Q96KV7 1748 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ADAMTS7Q9UKP4 1686 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 IFI6P09912 130 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 PSG7Q13046 419 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 C3orf36Q3SXR2 165 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 DTX2Q86UW9 622 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 RBM38Q9H0Z9 239 aaKnown RBP9.46□□□□□ -0.9
PTCH1-205ENST00000418258 PKDREJQ9NTG1 2253 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 TCF21O43680 179 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 SMIM6P0DI80 62 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF708P17019 499 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 ATOH7Q8N100 152 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 HIST1H2BAQ96A08 127 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 NUDT11Q96G61 164 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 LINC00312Q9Y6C7 94 aa9.46□□□□□ -0.9
PTCH1-205ENST00000418258 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TRGV4A0A0C4DH28 118 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 GREM1O60565 184 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 SAA1P0DJI8 122 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 JKAMPQ9P055 326 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TRBV5-7A0A0A0MS05 114 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 NBR2O15453 112 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 BEND2Q8NDZ0 799 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 HEATR5AQ86XA9 2040 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 GPX4P36969 197 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TMEM187Q14656 261 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 IGFBP2P18065 325 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TMEM183AQ8IXX5 376 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 COL4A1P02462 1669 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 RBMY1BA6NDE4 496 aaKnown RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 RBMY1EA6NEQ0 496 aaKnown RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 RBMY1DP0C7P1 496 aaKnown RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 RBMY1A1P0DJD3 496 aaKnown RBP9.45□□□□□ -0.9
PTCH1-205ENST00000418258 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 OR11H4Q8NGC9 324 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
PTCH1-205ENST00000418258 NPIPB13A6NJU9 1138 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms